Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is resA [H]
Identifier: 78222595
GI number: 78222595
Start: 1548165
End: 1548671
Strand: Direct
Name: resA [H]
Synonym: Gmet_1383
Alternate gene names: 78222595
Gene position: 1548165-1548671 (Clockwise)
Preceding gene: 78222594
Following gene: 78222596
Centisome position: 38.73
GC content: 62.33
Gene sequence:
>507_bases ATGAACCAATTGCTCCGCTACATCTGCGCCTGCCTGTTCACCCTGACGGTTCTCGCCGTGGCGGCGCCGGGCAAAGCCGA GAGTGATGCACCCCTCGTCCGAACCGGGGCGCTGGCCCCGAACTTCAAGCTGCCCACCCTCTCGGGTGAGAACAAAAGTC TCGCCCAGTATCGCGGCAAGATCGTCCTCGTGAACTTCTGGGCTTCCTGGTGCCCCTACTGCCGCGACGAGATGCCTTCC ATGGACCGGCTGGTCAAATCCTTCCCCAAGGGGGACCTGGTGGTACTGGCGGTCAACGTCGAAAAAAGATTTCCCGAAAA GTACCGCCGGGCCCCCGTATCGTTCAACTTTCTGAGCGACGCCACCGGCCAGGTGCAGCAGCGCTATGGCGCCAACCGCC TCCCGGACACGTTCATTGTCGACCGCAAGGGGATTATCCGGCAGCGGGTGACCGGCGGCATCGAGTGGGACGCCCCCAAG GTCGTCAGCTACCTGAAATCACTGTAG
Upstream 100 bases:
>100_bases GTAACCATCCTGCACAAAACCTCAGGCTGGAGGCTCTCCTTCAGCCTGAGGCACCGTACGATTCCACCGCACCGTAAACC GCATCAGAGAGGTTGTCTCC
Downstream 100 bases:
>100_bases CGGAGATACCATCATGGACTTTGGTTCCGATATCACCGTCTGGATCGCATTCTCCGCAGGATTCCTTTCCTTTTTCTCAC CCTGCGTTCTGCCGCTTATC
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNQLLRYICACLFTLTVLAVAAPGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPS MDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPK VVSYLKSL
Sequences:
>Translated_168_residues MNQLLRYICACLFTLTVLAVAAPGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPS MDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPK VVSYLKSL >Mature_168_residues MNQLLRYICACLFTLTVLAVAAPGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPS MDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPK VVSYLKSL
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18828; Mature: 18828
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLLRYICACLFTLTVLAVAAPGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCC IVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSD EEEEECHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEEECCHHHCCHHHHCCCCCEEHHHC ATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL CHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNQLLRYICACLFTLTVLAVAAPGKAESDAPLVRTGALAPNFKLPTLSGENKSLAQYRGK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCC IVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSD EEEEECHHHHCCHHHHCCCHHHHHHHHCCCCCEEEEEECCHHHCCHHHHCCCCCEEHHHC ATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL CHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA