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The map label for this gene is korB [H]

Identifier: 78222575

GI number: 78222575

Start: 1526756

End: 1527574

Strand: Direct

Name: korB [H]

Synonym: Gmet_1363

Alternate gene names: 78222575

Gene position: 1526756-1527574 (Clockwise)

Preceding gene: 78222574

Following gene: 78222576

Centisome position: 38.19

GC content: 55.8

Gene sequence:

>819_bases
ATGGCGTTTGATTACGATAAGTATATTCGTCCCGGTAAACTGCCGCACATCTGGTGCCCCGGCTGTGGCCACGGGATTGT
CATGAAAGGGTTGATCCGGGCAATGGACTCCCTCAACCTGAAAAAAGAAGAAACGTGCATTGTTTCGGGTATCGGCTGCG
CTTCGCGTCTGCCGGGCTATATTGATTGCTGCACGCTGCACACGGCCCACGGTCGGGCCGCCGCTTTCGCCACCGGCGTC
AAGATGGCGAAGCCTGAGATGAACGTTATCCTGTGCGGTGGTGATGGCGACGGTACCGCAATCGGCGGCAACCACTTCAT
TCATGCCTGCCGCCGTAACATCAACATGACGTACATCATTATGAACAACTACATCTACGGGATGACCGGCGGCCAGTTCT
CTCCCTGTACCCCCACTGGCGCCAAGGCTTCTACCACTCCCTACGGCAACCCGGATCCCGGTTTCGACATTGCCAAGCTT
GCCATCGGCGCGGGTGCAACCTTTGTTGCCCGTGGAACGGCATACCACGCTGCCCAGATTGACAAGCTGATTGCTGAGGC
GATCCAGCACAAGGGCTTCTCCGTTGTCGAAATCCTCGATGACTGCCCGACCACCTATGGGCGCCGCAACAAGTACCGCT
CCGTTATCGACATGATGAATCGCCTCAAGGAAGTTGCCGTTCCGGTGAAGGCCGCCGAGAAAATGACGGCCGAGCAACTG
GAAGGCAAGATCCTTACGGGTGTTCTTCACAAGATCGAGAAACCTGAATATACCGAGGAATATGCAAAGGTTATTCAGCG
GGCACAGGCTGCAAAATAA

Upstream 100 bases:

>100_bases
GCATCGAGGGGAATGCTCCGGTTATCGGTATTTTCCGGGTCGATGGCGAGCCGATCAATCCGGATCAGATCCTCGACAAG
ATGAAGGAGGTCAAGTAACC

Downstream 100 bases:

>100_bases
TCACCCTGATTGCAAAAGGAGACTATACAGATGGCTGGAAGATATGAAATTCGTTTTTCCGGGGCTGGCGGTCAGGGCCT
GATCCTGGCAGGCGTGATCA

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAFDYDKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDSLNLKKEETCIVSGIGCASRLPGYIDCCTLHTAHGRAAAFATGV
KMAKPEMNVILCGGDGDGTAIGGNHFIHACRRNINMTYIIMNNYIYGMTGGQFSPCTPTGAKASTTPYGNPDPGFDIAKL
AIGAGATFVARGTAYHAAQIDKLIAEAIQHKGFSVVEILDDCPTTYGRRNKYRSVIDMMNRLKEVAVPVKAAEKMTAEQL
EGKILTGVLHKIEKPEYTEEYAKVIQRAQAAK

Sequences:

>Translated_272_residues
MAFDYDKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDSLNLKKEETCIVSGIGCASRLPGYIDCCTLHTAHGRAAAFATGV
KMAKPEMNVILCGGDGDGTAIGGNHFIHACRRNINMTYIIMNNYIYGMTGGQFSPCTPTGAKASTTPYGNPDPGFDIAKL
AIGAGATFVARGTAYHAAQIDKLIAEAIQHKGFSVVEILDDCPTTYGRRNKYRSVIDMMNRLKEVAVPVKAAEKMTAEQL
EGKILTGVLHKIEKPEYTEEYAKVIQRAQAAK
>Mature_271_residues
AFDYDKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDSLNLKKEETCIVSGIGCASRLPGYIDCCTLHTAHGRAAAFATGVK
MAKPEMNVILCGGDGDGTAIGGNHFIHACRRNINMTYIIMNNYIYGMTGGQFSPCTPTGAKASTTPYGNPDPGFDIAKLA
IGAGATFVARGTAYHAAQIDKLIAEAIQHKGFSVVEILDDCPTTYGRRNKYRSVIDMMNRLKEVAVPVKAAEKMTAEQLE
GKILTGVLHKIEKPEYTEEYAKVIQRAQAAK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 29448; Mature: 29316

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDYDKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDSLNLKKEETCIVSGIGCASRLPGY
CCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCC
IDCCTLHTAHGRAAAFATGVKMAKPEMNVILCGGDGDGTAIGGNHFIHACRRNINMTYII
EEEEEEECCCCCHHHHHHCCEECCCCCCEEEECCCCCCCEECCHHHHHHHHHCCCEEEEE
MNNYIYGMTGGQFSPCTPTGAKASTTPYGNPDPGFDIAKLAIGAGATFVARGTAYHAAQI
ECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHH
DKLIAEAIQHKGFSVVEILDDCPTTYGRRNKYRSVIDMMNRLKEVAVPVKAAEKMTAEQL
HHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EGKILTGVLHKIEKPEYTEEYAKVIQRAQAAK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFDYDKYIRPGKLPHIWCPGCGHGIVMKGLIRAMDSLNLKKEETCIVSGIGCASRLPGY
CCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCC
IDCCTLHTAHGRAAAFATGVKMAKPEMNVILCGGDGDGTAIGGNHFIHACRRNINMTYII
EEEEEEECCCCCHHHHHHCCEECCCCCCEEEECCCCCCCEECCHHHHHHHHHCCCEEEEE
MNNYIYGMTGGQFSPCTPTGAKASTTPYGNPDPGFDIAKLAIGAGATFVARGTAYHAAQI
ECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHH
DKLIAEAIQHKGFSVVEILDDCPTTYGRRNKYRSVIDMMNRLKEVAVPVKAAEKMTAEQL
HHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EGKILTGVLHKIEKPEYTEEYAKVIQRAQAAK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]