Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222554
Identifier: 78222554
GI number: 78222554
Start: 1499016
End: 1500695
Strand: Direct
Name: 78222554
Synonym: Gmet_1341
Alternate gene names: NA
Gene position: 1499016-1500695 (Clockwise)
Preceding gene: 78222553
Following gene: 78222556
Centisome position: 37.5
GC content: 61.79
Gene sequence:
>1680_bases GTGTCCCAGCATGATTCATTGTTTTTTCCCGGTACCAGGATGCTTCGCGCAGTTTTGCTTGCGATCCTGGCTCTTCCGAT GCTTGCTTCAAGCGCATCGGCACTTTCTTCCCCCAACATCCCCCTGGACAGCCCCGTCTATTCCTATCTTGAAAAGCTGG CCGGTTTCGGACTGGTGCAATCAGACGTGGCGGGGATCAAGCCTTTTTCCCGGGCCGAGGCTGCGCGGCTTCTGCTGGAG GCGGAGTGGGCCCTGGAGGCGGGGGGGGGCTCCGGTGATCCGGCGTTTGCCCGGTCGATCATGGAGGAGTTGCGCCGGAA GATTCCCCGCGAAGCGGCTCTTTACACGGAACCCGACAAGGCGTCGGCCGTGGATGTGAACCCCCTGTCGAGCGCCCGGA TCAGGTATGTGTACCTGGATGGCAAACCCCGCTCCTACGAGCGGCCGGTCCACGACCCGGGCAACGACGGGGTGTTCGGC ATCGGCTCGGGGCTTCGGCCCGCCAATCCCTATCCTTCTCCCATACAGCAGCACGGCACCGAGGGAACGCCCCTCATGGA GAACAACGAGGGGATCATCTACCGGGACGGCCACAATGCCGAGCTGCGGTTCAGCGCCGAGGCCCACGTGAAGAGCGTGG CGTCCGCCCTGGTGGAGCCGCAGCTTTCCTATAGCAGGGGAGGGGACGGGGCTACGGTGAAGCTCGTCAAGGGGTACCTG AAGCTCGGCGGCGGTGGGCTGGAGCTGGAGGTGGGGCGGGATGCCAACTGGCTGGGGCTCGGGAACCGCGGAACGGTGAC CCTGACCAACAACGCCGAGAACTTCGACCTGGTGAAGCTATCGAGCCCCGAGCCCATTCAACTGAAGTATATCGGCGCCA TCAAGTATACCTTCATCGGCTCCCGCTTCGATGCCACCGTGACCAACGGCGTGGAGCGCCGTCCCTGGTTTCTCGGCGCG AAACTGTCGGTGAAGCCCGTTGATATCTTTGAATTGGGGATCAACCTGGGGAAGGAGTTCGGCGGGCCAGGGGTGAACAA CAGCTTCGGTGATTACGTGCGGGGGATTGTCGGCGGCACGAGCGCGGATAATACCAACAACCTGGCCGGGGTGGAGATGC GATTGAGGCTCCCGTTCCTGCGCAATACCGAGATCTACGGCGAGTTCTCCGGGGAGGATTCGGCCTCATTCTGGCCCATC GTGGAGAGCTACGTGGCCGGCTTCTTCATCCCCCGTCTCACTGCCGGCGGCAGGGACGACCTCCGCTTCGAGTTCTTCAA GGGGAACAACATCCTCTACACCAGCGGCACATTCCCGGAGGGATACCTCTATAAGGGGATGCCTATCGGCCACTCCCAGG GGGGAGCGGTCATCGAGTTCTATCTCCGCTACAGCCACTGGTTCTCGGCGCGGAACAATCTGGCGCTGGAGTTCTACCGC ACCGACCGGGGCCACGAGGGGAGGGTGAAGGTGGACGCCGCAGGCAACTTTGATCCGAATGGCGTCATGCAGGCCATCGA GAAAAAGCATGCTGGCCGGATTTCCTGGACCCTCCCGGTCCATGGCGATCTGGACATGAACCTTCTATACGGCATCGAGA AGGTCGAAAATGTTGACCTGCGGTCAGGAAATGACCGCACCAACCAGCTCTTCAAGGCGGAGTTGCGGTATCGGTATTGA
Upstream 100 bases:
>100_bases TCGAGCTTGGTGGACTGTGTGAGTTTCGAGCTCATGCGCATGGAAGGGATTGTGTCGGCCTTTACTTTTGACAGGCATTT CAAGGAACAGGGGTTCATCT
Downstream 100 bases:
>100_bases GTGAGATAGCGAGGAGCGAGGTAGTGAGGTAGCAAAAAGAAAGAAGCAAGTGCTGAGGAGTAAGACGGTGGGAGGACTGG ATTGGAGAAGCCGCATAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MSQHDSLFFPGTRMLRAVLLAILALPMLASSASALSSPNIPLDSPVYSYLEKLAGFGLVQSDVAGIKPFSRAEAARLLLE AEWALEAGGGSGDPAFARSIMEELRRKIPREAALYTEPDKASAVDVNPLSSARIRYVYLDGKPRSYERPVHDPGNDGVFG IGSGLRPANPYPSPIQQHGTEGTPLMENNEGIIYRDGHNAELRFSAEAHVKSVASALVEPQLSYSRGGDGATVKLVKGYL KLGGGGLELEVGRDANWLGLGNRGTVTLTNNAENFDLVKLSSPEPIQLKYIGAIKYTFIGSRFDATVTNGVERRPWFLGA KLSVKPVDIFELGINLGKEFGGPGVNNSFGDYVRGIVGGTSADNTNNLAGVEMRLRLPFLRNTEIYGEFSGEDSASFWPI VESYVAGFFIPRLTAGGRDDLRFEFFKGNNILYTSGTFPEGYLYKGMPIGHSQGGAVIEFYLRYSHWFSARNNLALEFYR TDRGHEGRVKVDAAGNFDPNGVMQAIEKKHAGRISWTLPVHGDLDMNLLYGIEKVENVDLRSGNDRTNQLFKAELRYRY
Sequences:
>Translated_559_residues MSQHDSLFFPGTRMLRAVLLAILALPMLASSASALSSPNIPLDSPVYSYLEKLAGFGLVQSDVAGIKPFSRAEAARLLLE AEWALEAGGGSGDPAFARSIMEELRRKIPREAALYTEPDKASAVDVNPLSSARIRYVYLDGKPRSYERPVHDPGNDGVFG IGSGLRPANPYPSPIQQHGTEGTPLMENNEGIIYRDGHNAELRFSAEAHVKSVASALVEPQLSYSRGGDGATVKLVKGYL KLGGGGLELEVGRDANWLGLGNRGTVTLTNNAENFDLVKLSSPEPIQLKYIGAIKYTFIGSRFDATVTNGVERRPWFLGA KLSVKPVDIFELGINLGKEFGGPGVNNSFGDYVRGIVGGTSADNTNNLAGVEMRLRLPFLRNTEIYGEFSGEDSASFWPI VESYVAGFFIPRLTAGGRDDLRFEFFKGNNILYTSGTFPEGYLYKGMPIGHSQGGAVIEFYLRYSHWFSARNNLALEFYR TDRGHEGRVKVDAAGNFDPNGVMQAIEKKHAGRISWTLPVHGDLDMNLLYGIEKVENVDLRSGNDRTNQLFKAELRYRY >Mature_558_residues SQHDSLFFPGTRMLRAVLLAILALPMLASSASALSSPNIPLDSPVYSYLEKLAGFGLVQSDVAGIKPFSRAEAARLLLEA EWALEAGGGSGDPAFARSIMEELRRKIPREAALYTEPDKASAVDVNPLSSARIRYVYLDGKPRSYERPVHDPGNDGVFGI GSGLRPANPYPSPIQQHGTEGTPLMENNEGIIYRDGHNAELRFSAEAHVKSVASALVEPQLSYSRGGDGATVKLVKGYLK LGGGGLELEVGRDANWLGLGNRGTVTLTNNAENFDLVKLSSPEPIQLKYIGAIKYTFIGSRFDATVTNGVERRPWFLGAK LSVKPVDIFELGINLGKEFGGPGVNNSFGDYVRGIVGGTSADNTNNLAGVEMRLRLPFLRNTEIYGEFSGEDSASFWPIV ESYVAGFFIPRLTAGGRDDLRFEFFKGNNILYTSGTFPEGYLYKGMPIGHSQGGAVIEFYLRYSHWFSARNNLALEFYRT DRGHEGRVKVDAAGNFDPNGVMQAIEKKHAGRISWTLPVHGDLDMNLLYGIEKVENVDLRSGNDRTNQLFKAELRYRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61254; Mature: 61123
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHDSLFFPGTRMLRAVLLAILALPMLASSASALSSPNIPLDSPVYSYLEKLAGFGLVQ CCCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCEEH SDVAGIKPFSRAEAARLLLEAEWALEAGGGSGDPAFARSIMEELRRKIPREAALYTEPDK HHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCEEECCCC ASAVDVNPLSSARIRYVYLDGKPRSYERPVHDPGNDGVFGIGSGLRPANPYPSPIQQHGT CCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCC EGTPLMENNEGIIYRDGHNAELRFSAEAHVKSVASALVEPQLSYSRGGDGATVKLVKGYL CCCCEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEHEEEHHH KLGGGGLELEVGRDANWLGLGNRGTVTLTNNAENFDLVKLSSPEPIQLKYIGAIKYTFIG HCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEC SRFDATVTNGVERRPWFLGAKLSVKPVDIFELGINLGKEFGGPGVNNSFGDYVRGIVGGT CCCCCHHHCCCCCCCEEECCEEECCCCHHEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCC SADNTNNLAGVEMRLRLPFLRNTEIYGEFSGEDSASFWPIVESYVAGFFIPRLTAGGRDD CCCCCCCEEEEEEEEECCCEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC LRFEFFKGNNILYTSGTFPEGYLYKGMPIGHSQGGAVIEFYLRYSHWFSARNNLALEFYR CEEEEEECCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEEE TDRGHEGRVKVDAAGNFDPNGVMQAIEKKHAGRISWTLPVHGDLDMNLLYGIEKVENVDL CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCHHHHCCCCC RSGNDRTNQLFKAELRYRY CCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SQHDSLFFPGTRMLRAVLLAILALPMLASSASALSSPNIPLDSPVYSYLEKLAGFGLVQ CCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCEEH SDVAGIKPFSRAEAARLLLEAEWALEAGGGSGDPAFARSIMEELRRKIPREAALYTEPDK HHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCEEECCCC ASAVDVNPLSSARIRYVYLDGKPRSYERPVHDPGNDGVFGIGSGLRPANPYPSPIQQHGT CCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCC EGTPLMENNEGIIYRDGHNAELRFSAEAHVKSVASALVEPQLSYSRGGDGATVKLVKGYL CCCCEEECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEHEEEHHH KLGGGGLELEVGRDANWLGLGNRGTVTLTNNAENFDLVKLSSPEPIQLKYIGAIKYTFIG HCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEC SRFDATVTNGVERRPWFLGAKLSVKPVDIFELGINLGKEFGGPGVNNSFGDYVRGIVGGT CCCCCHHHCCCCCCCEEECCEEECCCCHHEEHHHHHHHHHCCCCCCCCHHHHHHHHHCCC SADNTNNLAGVEMRLRLPFLRNTEIYGEFSGEDSASFWPIVESYVAGFFIPRLTAGGRDD CCCCCCCEEEEEEEEECCCEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC LRFEFFKGNNILYTSGTFPEGYLYKGMPIGHSQGGAVIEFYLRYSHWFSARNNLALEFYR CEEEEEECCEEEEECCCCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEEE TDRGHEGRVKVDAAGNFDPNGVMQAIEKKHAGRISWTLPVHGDLDMNLLYGIEKVENVDL CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHCHHHHCCCCC RSGNDRTNQLFKAELRYRY CCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA