Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222535
Identifier: 78222535
GI number: 78222535
Start: 1479599
End: 1479829
Strand: Direct
Name: 78222535
Synonym: Gmet_1322
Alternate gene names: NA
Gene position: 1479599-1479829 (Clockwise)
Preceding gene: 78222534
Following gene: 78222536
Centisome position: 37.01
GC content: 49.35
Gene sequence:
>231_bases ATGGGGCGCCTGTCGGGATTTCGTTATCGTGAGATTATCAAACGTCTCAAGGCCTTCGGATTCGTTTTCGATCGACAGGC GGCAGGGAGTCACGAGATTTGGTACAACCCTGATAAAGACAAGTATACGACGATTCCGAACCACGCCGGCGACATGCCTG AAGGGACTCTTAGGGCGATACTGAAACAGGCTGAAATAGATCCTGAAGATTTTCTGAAAACCGGCAAGTAA
Upstream 100 bases:
>100_bases GCACGACGCTTGATTGAAGCGCAGACGGAACGAAAAAAAACCATAAAGCTGAAACCCATCAGAAAGAGTTTTGATCTGGA TTTGGTAGTCGGAAACTGAT
Downstream 100 bases:
>100_bases GATGATGCTGTTATTTTCCGAGTGAAGGGCGAAGTGGGAGCTTTTTTTGCCGGGAAATATGGGGAGTGTCCCTCATTTCC CCTCCTCATTTCCCCTCATT
Product: YcfA-like
Products: NA
Alternate protein names: YcfA-Like
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MGRLSGFRYREIIKRLKAFGFVFDRQAAGSHEIWYNPDKDKYTTIPNHAGDMPEGTLRAILKQAEIDPEDFLKTGK
Sequences:
>Translated_76_residues MGRLSGFRYREIIKRLKAFGFVFDRQAAGSHEIWYNPDKDKYTTIPNHAGDMPEGTLRAILKQAEIDPEDFLKTGK >Mature_75_residues GRLSGFRYREIIKRLKAFGFVFDRQAAGSHEIWYNPDKDKYTTIPNHAGDMPEGTLRAILKQAEIDPEDFLKTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8758; Mature: 8627
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLSGFRYREIIKRLKAFGFVFDRQAAGSHEIWYNPDKDKYTTIPNHAGDMPEGTLRAI CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LKQAEIDPEDFLKTGK HHHHCCCHHHHHCCCC >Mature Secondary Structure GRLSGFRYREIIKRLKAFGFVFDRQAAGSHEIWYNPDKDKYTTIPNHAGDMPEGTLRAI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LKQAEIDPEDFLKTGK HHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA