Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222529
Identifier: 78222529
GI number: 78222529
Start: 1475970
End: 1477139
Strand: Reverse
Name: 78222529
Synonym: Gmet_1315
Alternate gene names: NA
Gene position: 1477139-1475970 (Counterclockwise)
Preceding gene: 78222555
Following gene: 78222519
Centisome position: 36.95
GC content: 53.25
Gene sequence:
>1170_bases ATGCACACCGGTCCGACCGTTTTCAAACAACTTCTGCAGTTTCTGCCCCGGTACGAATTCAATCTCTGCGTTCGCCGACA CCGTGGCGAGTATCGGGAGAAGAAGTTCTCGACCTATGACCAGTTCCTCTGCCTGGCTTATGCCCAGATGGCTGGCCGTG AGAGCTTGCGGGATATCGAGACCTGCCTGAACTCCCACCAGGAGAAGCTGTACCACATCGGCTTTCGTGGTGATGTCTCC CGCACGACCCTTGCCGACGCGAACGAGCGCAGGGACTGGCGTATCTTCCAAGACTTCGGTCATGTACTGATCGGCATAGC TCAGCAGCTGTACCAGGCTGATGCCATCGCCGTTGAGCTTACGCAACCGCTCTACGCCTTTGACTCGACCACTATCGACC TGTGCCTTACGCTGTTCCCATGGGCCGAGTTCCGCAAAACCAAGGCGGCGGTCAAGATGCATACGCTCATTGATCTGCGT GGTCCCATTCCAACCTGGGTCACTATTACCACTGGCAAGGTCCACGATGTCAGGATGCTGGACCATCTGCCGGTTGCAAA GGATGCCATTTACACGATGGACAGAGGGTATGTCGATTTTGCCCGGCTCCACTCCATCCACAAGCAGGGAGCATTCTTCG TAGTTCGGGCAAAGGACAACCTGAAATGCCAGCGGTTATATTCCCATCCGAAGGACAAGGAATCAGGTGTACGGGCAGAC CAGATTATCACCCTGGTGACGCAGAAGTCGAAAAAGGGGTATCCGGAGAAACTGCGCCGGGTCAGCTATGTTGACAAAGA ACGGAACAAGCGACTCGTATTTCTCACGAACAACTTCGAGATTCCGGCAGCGACGGTGGCTGCGATTTACAAGCAGCGCT GGCAGGTGGAGCTGTTTTTCAAATGGATCAAACAGCACCTGCGGATCAAGTCGTTCATCGGAACGTCAGTCAATGCCGTG AAGAGCCAGATATGGGTTGCCTTGTGCATCTATCTGCTGGTGGCGATCACGAAAAAGAAGTTGGGGGTTCCGTGTTCGCT CTACACTTTTCTACAGATTCTGGAGGTCAACTTGTTCGAGAAAAAGCCCATTTCATCGCTGGTTGCGGAGGCTCTCAAGC GAAATGCTGATTATCCTGAGCGCAACCAACTGAACTTATTCAACTATTAA
Upstream 100 bases:
>100_bases CTGTAACTTGTTGAACTTTATTGCTCTTTGGCACAATTGTTCTTTTTTCGACATGAATTCGTTCTGGGTGTAGCCTTCCT CCCTTTACAGGAGGGGAGCA
Downstream 100 bases:
>100_bases CCGGACAGTAGTGATCCAAAATAGGAAATTCTCTCATTCTCGCAAAAGCGTTTACGCTTTATCACTCACTTCCTGCACAG GCGACATGAGGAACTCCGTC
Product: transposase IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAIAVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY
Sequences:
>Translated_389_residues MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAIAVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY >Mature_389_residues MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIETCLNSHQEKLYHIGFRGDVS RTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAIAVELTQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLR GPIPTWVTITTGKVHDVRMLDHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFFKWIKQHLRIKSFIGTSVNAV KSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFEKKPISSLVAEALKRNADYPERNQLNLFNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 - InterPro: IPR014736 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 45334; Mature: 45334
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIE CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH TCLNSHQEKLYHIGFRGDVSRTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAIAVEL HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE TQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLRGPIPTWVTITTGKVHDVRML CCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH DHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHH QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFF HHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH KWIKQHLRIKSFIGTSVNAVKSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC KKPISSLVAEALKRNADYPERNQLNLFNY CCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTGPTVFKQLLQFLPRYEFNLCVRRHRGEYREKKFSTYDQFLCLAYAQMAGRESLRDIE CCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH TCLNSHQEKLYHIGFRGDVSRTTLADANERRDWRIFQDFGHVLIGIAQQLYQADAIAVEL HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE TQPLYAFDSTTIDLCLTLFPWAEFRKTKAAVKMHTLIDLRGPIPTWVTITTGKVHDVRML CCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH DHLPVAKDAIYTMDRGYVDFARLHSIHKQGAFFVVRAKDNLKCQRLYSHPKDKESGVRAD HCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHH QIITLVTQKSKKGYPEKLRRVSYVDKERNKRLVFLTNNFEIPAATVAAIYKQRWQVELFF HHHHEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH KWIKQHLRIKSFIGTSVNAVKSQIWVALCIYLLVAITKKKLGVPCSLYTFLQILEVNLFE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC KKPISSLVAEALKRNADYPERNQLNLFNY CCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]