Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is yhbN [C]
Identifier: 78222495
GI number: 78222495
Start: 1442060
End: 1442569
Strand: Direct
Name: yhbN [C]
Synonym: Gmet_1281
Alternate gene names: 78222495
Gene position: 1442060-1442569 (Clockwise)
Preceding gene: 78222494
Following gene: 78222496
Centisome position: 36.07
GC content: 56.08
Gene sequence:
>510_bases ATGAAACGAATGCTCACGGTGCTGCTTTTCCTCGTGGTGGTATCACTGGGGACCGCGCATTCCGCACAACTCCCAAAGGG GGGGCGGCAAGGGCAGCCTATTACCATTAAATCCAATGAACTGTCCACGGACAGCAGGCATAATACGGCAACATTCACCG GCAAAGTCATCGCTCGCCAAGGTGATCTGACGATCTACGCAGACAAGCTGGTTGTCCACTACAAGGCTGATGGTGGCGAT CTCGACAGAGTTGAAGCATCGGGCAACGTGCGGATCGTCCAGGGAGATCGCCTCGCCACGGCTCGCGACGGGGTCTACCA GAGTGCCGAGCAGAAGATCGTTCTGACCGGCGACCCCAAGGTTTTTCAAGGTGAGAATACGGTGTCCGGCAAAGTCATCA CCTACTTTGTAGACGAAGAGAAAAGCATTGTCACGGGCGGTCCGGACACAAGGGTAGAGGCGGTCATTACGCCAAAGGAA AAGGGGAAGGATGGCGGCCAACAGCGCTGA
Upstream 100 bases:
>100_bases AGCGTCTCTGGCGTGGGAATGGAACTATCCGTCAAGACGCGTCAGGTGAGGATTTTGAGAGACGTAACCGCGACTGTCGC GCCGGGGAAAAAGGGATAAT
Downstream 100 bases:
>100_bases TATGGTTTTGCAGGCGCATGGCCTCCGGAAGGGATTCGGCAAGCGTGTCGTCGTGAATGGGGTTGACCTGCGGGTTGCCA CCGGCGAGGTGGTGGGGCTG
Product: OstA-like protein
Products: NA
Alternate protein names: OstA Family Protein; OstA-Like Protein; Organic Solvent lerance Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKRMLTVLLFLVVVSLGTAHSAQLPKGGRQGQPITIKSNELSTDSRHNTATFTGKVIARQGDLTIYADKLVVHYKADGGD LDRVEASGNVRIVQGDRLATARDGVYQSAEQKIVLTGDPKVFQGENTVSGKVITYFVDEEKSIVTGGPDTRVEAVITPKE KGKDGGQQR
Sequences:
>Translated_169_residues MKRMLTVLLFLVVVSLGTAHSAQLPKGGRQGQPITIKSNELSTDSRHNTATFTGKVIARQGDLTIYADKLVVHYKADGGD LDRVEASGNVRIVQGDRLATARDGVYQSAEQKIVLTGDPKVFQGENTVSGKVITYFVDEEKSIVTGGPDTRVEAVITPKE KGKDGGQQR >Mature_169_residues MKRMLTVLLFLVVVSLGTAHSAQLPKGGRQGQPITIKSNELSTDSRHNTATFTGKVIARQGDLTIYADKLVVHYKADGGD LDRVEASGNVRIVQGDRLATARDGVYQSAEQKIVLTGDPKVFQGENTVSGKVITYFVDEEKSIVTGGPDTRVEAVITPKE KGKDGGQQR
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18225; Mature: 18225
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMLTVLLFLVVVSLGTAHSAQLPKGGRQGQPITIKSNELSTDSRHNTATFTGKVIARQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEC GDLTIYADKLVVHYKADGGDLDRVEASGNVRIVQGDRLATARDGVYQSAEQKIVLTGDPK CCEEEEEEEEEEEEECCCCCCEEEECCCCEEEEECCCEECCCCCCCCCCCCEEEEECCCC VFQGENTVSGKVITYFVDEEKSIVTGGPDTRVEAVITPKEKGKDGGQQR EEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCHHCCCCCCCCC >Mature Secondary Structure MKRMLTVLLFLVVVSLGTAHSAQLPKGGRQGQPITIKSNELSTDSRHNTATFTGKVIARQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEC GDLTIYADKLVVHYKADGGDLDRVEASGNVRIVQGDRLATARDGVYQSAEQKIVLTGDPK CCEEEEEEEEEEEEECCCCCCEEEECCCCEEEEECCCEECCCCCCCCCCCCEEEEECCCC VFQGENTVSGKVITYFVDEEKSIVTGGPDTRVEAVITPKEKGKDGGQQR EEECCCCCCCEEEEEEECCCCEEEECCCCCEEEEEECCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA