Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is ilvI [H]
Identifier: 78222474
GI number: 78222474
Start: 1420132
End: 1421832
Strand: Direct
Name: ilvI [H]
Synonym: Gmet_1260
Alternate gene names: 78222474
Gene position: 1420132-1421832 (Clockwise)
Preceding gene: 78222473
Following gene: 78222475
Centisome position: 35.53
GC content: 58.55
Gene sequence:
>1701_bases ATGAAAATGACAGGTGCACGAATCCTCCTTGAATGTCTCAAGCGTGAAGGAGTTGATACTGTTTTCGGTTACCCCGGGGG CACGGTGATCAATCTCTACGACGAGCTTTTCAGCTTCAAGGATATCCGCCATATTCTGCCCCGCCACGAACAGGCAGGTG TCCATGCGGCTGATGGATTTGCCCGTGCCACCGGCAGGGTCGGTGTCGCCATCGCCACCTCCGGCCCCGGTGCCACCAAT ACGGTTACCGGTATCGCGACCGCCTACATGGACTCCATCCCCCTTGTGGTGATAACCGGCCAGGTGCCCACGGCCCTCAT TGGCAATGATGCCTTCCAGGAGGTGGACATCATCGGCATTACCCGCCCCTGCACCAAGCACAACTTTCTCGTGAAAGACG TGAAGGATATCGCCACGATCATCAAGAAAGCCTTTTACATTGCCCGCACCGGGCGTCCCGGGCCGGTTCTCGTGGACCTG CCGAAGGATGTGCAGATCGCCACGGCCGAGTTTGAGTATCCCGAAGCCATTGAGCTTCGCAGCTACAAACCGACCGTGGA GGGTCACCCGAAGCAGATCGAGAAGGCCGTGTCCATGCTCCTGGCGGCTAAGAAGCCGGTCATGTACGTGGGAGGGGGCG CCATTTCCGGTGATGCCGCCGGTGAACTCACTGCCCTAGCCACCAGACTCCACATCCCGGTCACCACAACCCTCATGGGA CTCGGTTCCTTCCCCGAGGACAATCCCCTCTCTCTCAAGCTTCTCGGGATGCATGGCACCTATTTCGCCAATATGGCGGT GACCAACTGCGACCTGCTGGTTGCCGTGGGGGCGCGCTTCGACGACCGGGTGACCGGAAAGATCGCCACCTTCGCTCCCC ATGCAAAGATCATCCATATGGACGTGGACCCGACATCCATTCGGAAGAACGTCCGGGTTGACCTTCCGATTGTTGGTCAG GTCAAGGAAGTCCTTGGTCGCATGCTCAAGTCCCTTGATGAGAGCGGTGACAAGGTAGCCGCGTTCCATACGGCGATCGA ACCGTGGCTTGCGGAAATCGAGGGGTGGAAGCAGAAGCATCCAATAACCTACAAGCAGGCATCCACGGTGATCAAACCCC AGTTCGTGATCCAGAAACTTCGTGAGCTTTCTGATCCCGACGCCATTGTGGCCACCGACGTGGGGCAGCACCAGATGTGG ACTGCCCAGTTCTTCGGGTTCCGTGAGCCCCGTACGCTCCTGTCGTCCGGCGGGCTCGGAACCATGGGATTCGGATTGCC AGCGGCCATGGGGGCCCAGGCAGCCTTCCCGAACCGGCAGGTCATCGCGGTTTGCGGCGACGGCGGTTTCCAGATGAACC TCCAGGAGGTGGCAACGCTGGTCCAGAATCGGCTTCCCGTGAAGATCGTCATACTCAACAATAACTTCCTCGGCATGGTG CGCCAGTGGCAGGAACTCTTCTTCGATAAGCGCTATTCACAGACCTGCATGGAGCTTCCCATTGATTTCATCAAGCTTGC CGAGGCGTTCGGGGCTAAGGGGTTCCAGGCGACAAAATCCGACGAGGTGGAAGCTACCATCAAGAAGGCCTTCGAGACGC CAGGACCGGTTATCATGGAATTCAAGATCGCCCGGGAGGAGAAGGTTCTCCCCATGGTTCCTGCCGGGGCGTCGCTCAAT GAAATGGTGCTCAATGCCTGA
Upstream 100 bases:
>100_bases TACACCGGCGCGGTTACCACAGCCGAATAGGAACGATTCTGCAATCGCTCCCGTAGACCAGTCGCTCCACTATCTGATTT CCCTTTTGGGAGGTTTTTCT
Downstream 100 bases:
>100_bases TTGGCGCCGTTACGCGCCAGGGATTCCGATCTTGCCTGCTCTTCAGGAGGTTTTTTTATGAGACATACAATCACCGTTCT GGTGGAAAACGAATTTGGTG
Product: acetolactate synthase, large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MKMTGARILLECLKREGVDTVFGYPGGTVINLYDELFSFKDIRHILPRHEQAGVHAADGFARATGRVGVAIATSGPGATN TVTGIATAYMDSIPLVVITGQVPTALIGNDAFQEVDIIGITRPCTKHNFLVKDVKDIATIIKKAFYIARTGRPGPVLVDL PKDVQIATAEFEYPEAIELRSYKPTVEGHPKQIEKAVSMLLAAKKPVMYVGGGAISGDAAGELTALATRLHIPVTTTLMG LGSFPEDNPLSLKLLGMHGTYFANMAVTNCDLLVAVGARFDDRVTGKIATFAPHAKIIHMDVDPTSIRKNVRVDLPIVGQ VKEVLGRMLKSLDESGDKVAAFHTAIEPWLAEIEGWKQKHPITYKQASTVIKPQFVIQKLRELSDPDAIVATDVGQHQMW TAQFFGFREPRTLLSSGGLGTMGFGLPAAMGAQAAFPNRQVIAVCGDGGFQMNLQEVATLVQNRLPVKIVILNNNFLGMV RQWQELFFDKRYSQTCMELPIDFIKLAEAFGAKGFQATKSDEVEATIKKAFETPGPVIMEFKIAREEKVLPMVPAGASLN EMVLNA
Sequences:
>Translated_566_residues MKMTGARILLECLKREGVDTVFGYPGGTVINLYDELFSFKDIRHILPRHEQAGVHAADGFARATGRVGVAIATSGPGATN TVTGIATAYMDSIPLVVITGQVPTALIGNDAFQEVDIIGITRPCTKHNFLVKDVKDIATIIKKAFYIARTGRPGPVLVDL PKDVQIATAEFEYPEAIELRSYKPTVEGHPKQIEKAVSMLLAAKKPVMYVGGGAISGDAAGELTALATRLHIPVTTTLMG LGSFPEDNPLSLKLLGMHGTYFANMAVTNCDLLVAVGARFDDRVTGKIATFAPHAKIIHMDVDPTSIRKNVRVDLPIVGQ VKEVLGRMLKSLDESGDKVAAFHTAIEPWLAEIEGWKQKHPITYKQASTVIKPQFVIQKLRELSDPDAIVATDVGQHQMW TAQFFGFREPRTLLSSGGLGTMGFGLPAAMGAQAAFPNRQVIAVCGDGGFQMNLQEVATLVQNRLPVKIVILNNNFLGMV RQWQELFFDKRYSQTCMELPIDFIKLAEAFGAKGFQATKSDEVEATIKKAFETPGPVIMEFKIAREEKVLPMVPAGASLN EMVLNA >Mature_566_residues MKMTGARILLECLKREGVDTVFGYPGGTVINLYDELFSFKDIRHILPRHEQAGVHAADGFARATGRVGVAIATSGPGATN TVTGIATAYMDSIPLVVITGQVPTALIGNDAFQEVDIIGITRPCTKHNFLVKDVKDIATIIKKAFYIARTGRPGPVLVDL PKDVQIATAEFEYPEAIELRSYKPTVEGHPKQIEKAVSMLLAAKKPVMYVGGGAISGDAAGELTALATRLHIPVTTTLMG LGSFPEDNPLSLKLLGMHGTYFANMAVTNCDLLVAVGARFDDRVTGKIATFAPHAKIIHMDVDPTSIRKNVRVDLPIVGQ VKEVLGRMLKSLDESGDKVAAFHTAIEPWLAEIEGWKQKHPITYKQASTVIKPQFVIQKLRELSDPDAIVATDVGQHQMW TAQFFGFREPRTLLSSGGLGTMGFGLPAAMGAQAAFPNRQVIAVCGDGGFQMNLQEVATLVQNRLPVKIVILNNNFLGMV RQWQELFFDKRYSQTCMELPIDFIKLAEAFGAKGFQATKSDEVEATIKKAFETPGPVIMEFKIAREEKVLPMVPAGASLN EMVLNA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=551, Percent_Identity=25.7713248638838, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI93004078, Length=562, Percent_Identity=25.6227758007117, Blast_Score=163, Evalue=4e-40, Organism=Escherichia coli, GI87081685, Length=568, Percent_Identity=49.8239436619718, Blast_Score=582, Evalue=1e-167, Organism=Escherichia coli, GI1790104, Length=563, Percent_Identity=42.9840142095915, Blast_Score=457, Evalue=1e-129, Organism=Escherichia coli, GI1786717, Length=554, Percent_Identity=34.2960288808664, Blast_Score=324, Evalue=7e-90, Organism=Escherichia coli, GI1787096, Length=555, Percent_Identity=30.2702702702703, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI1788716, Length=563, Percent_Identity=26.6429840142096, Blast_Score=169, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17531299, Length=585, Percent_Identity=28.8888888888889, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17531301, Length=585, Percent_Identity=28.8888888888889, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17542570, Length=516, Percent_Identity=27.7131782945736, Blast_Score=148, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6323755, Length=583, Percent_Identity=46.8267581475129, Blast_Score=513, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6320816, Length=491, Percent_Identity=25.6619144602851, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6320123, Length=551, Percent_Identity=23.2304900181488, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6321524, Length=540, Percent_Identity=23.7037037037037, Blast_Score=108, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6323163, Length=594, Percent_Identity=25.0841750841751, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323073, Length=594, Percent_Identity=25.2525252525253, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI19922626, Length=574, Percent_Identity=25.7839721254355, Blast_Score=170, Evalue=3e-42,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61485; Mature: 61485
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTGARILLECLKREGVDTVFGYPGGTVINLYDELFSFKDIRHILPRHEQAGVHAADGF CCCCHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH ARATGRVGVAIATSGPGATNTVTGIATAYMDSIPLVVITGQVPTALIGNDAFQEVDIIGI HHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHCEEEEEE TRPCTKHNFLVKDVKDIATIIKKAFYIARTGRPGPVLVDLPKDVQIATAEFEYPEAIELR CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEECCCCCCCEEEC SYKPTVEGHPKQIEKAVSMLLAAKKPVMYVGGGAISGDAAGELTALATRLHIPVTTTLMG CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHHHHHEEECCHHHHHHH LGSFPEDNPLSLKLLGMHGTYFANMAVTNCDLLVAVGARFDDRVTGKIATFAPHAKIIHM CCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCEEEEE DVDPTSIRKNVRVDLPIVGQVKEVLGRMLKSLDESGDKVAAFHTAIEPWLAEIEGWKQKH ECCHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHCC PITYKQASTVIKPQFVIQKLRELSDPDAIVATDVGQHQMWTAQFFGFREPRTLLSSGGLG CEEHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHCCCCCCHHHHHCCCCC TMGFGLPAAMGAQAAFPNRQVIAVCGDGGFQMNLQEVATLVQNRLPVKIVILNNNFLGMV CCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHCCCCEEEEEECCCHHHHH RQWQELFFDKRYSQTCMELPIDFIKLAEAFGAKGFQATKSDEVEATIKKAFETPGPVIME HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE FKIAREEKVLPMVPAGASLNEMVLNA EEECCCCCCCEECCCCCCHHHHHCCC >Mature Secondary Structure MKMTGARILLECLKREGVDTVFGYPGGTVINLYDELFSFKDIRHILPRHEQAGVHAADGF CCCCHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH ARATGRVGVAIATSGPGATNTVTGIATAYMDSIPLVVITGQVPTALIGNDAFQEVDIIGI HHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHCEEEEEE TRPCTKHNFLVKDVKDIATIIKKAFYIARTGRPGPVLVDLPKDVQIATAEFEYPEAIELR CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEECCCCCCCEEEC SYKPTVEGHPKQIEKAVSMLLAAKKPVMYVGGGAISGDAAGELTALATRLHIPVTTTLMG CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHHHHHEEECCHHHHHHH LGSFPEDNPLSLKLLGMHGTYFANMAVTNCDLLVAVGARFDDRVTGKIATFAPHAKIIHM CCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCEEEEE DVDPTSIRKNVRVDLPIVGQVKEVLGRMLKSLDESGDKVAAFHTAIEPWLAEIEGWKQKH ECCHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHCC PITYKQASTVIKPQFVIQKLRELSDPDAIVATDVGQHQMWTAQFFGFREPRTLLSSGGLG CEEHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEHHHHCCCCCCHHHHHCCCCC TMGFGLPAAMGAQAAFPNRQVIAVCGDGGFQMNLQEVATLVQNRLPVKIVILNNNFLGMV CCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECHHHHHHHHHCCCCEEEEEECCCHHHHH RQWQELFFDKRYSQTCMELPIDFIKLAEAFGAKGFQATKSDEVEATIKKAFETPGPVIME HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE FKIAREEKVLPMVPAGASLNEMVLNA EEECCCCCCCEECCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]