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The map label for this gene is yfgC [C]

Identifier: 78222452

GI number: 78222452

Start: 1396172

End: 1397008

Strand: Direct

Name: yfgC [C]

Synonym: Gmet_1238

Alternate gene names: 78222452

Gene position: 1396172-1397008 (Clockwise)

Preceding gene: 78222451

Following gene: 78222453

Centisome position: 34.93

GC content: 59.14

Gene sequence:

>837_bases
ATGTTCACTGAAACAGGACTGAAATCAGGGAGGAGAACCATGAGATTCGCACGACTGCTGTTGCTGCCCCTTATCGTCAT
CGGAACGTTGTCCGGCTGCGCCGTCAACATGGCGGACATCCACGGTTTCAACGTCATCTCCCTTGAACAGGAAAAGGAGC
TCGGCACCAAGTTCGCGGCTGAGATCGAAAAGCAGTATCCGGTCTATAACGACCCAGAAGCCCAGAAGTACGTTGATCGT
CTCGGCCGCAGGCTCCTGACCGGAGCCCGGGAGGTGAGCTTCGACTACGTCTTCAAGGTGGTGAAGGATGACAGCGTCAA
CGCCTTTGCCATTCCCGGCGGCCGGCTCTATGTCCACACCGGGCTCCTCAAGGCGGCCCAGAGCGAGACGGAGGTGGCGG
CGGTCATGGCCCACGAGATCAGCCATGCGGTGGCCCGGCACGGCACCCGCCAGATGACCCAGCAGTATGGCTATTCCCTG
GTCCTCTCCCTGGTCCTGGGGCAGAACTCGAACATGCTGGCACAGATTGCCGGAGAGCTCTTCGGCAAGGCGGGGATGAT
GTCCTACAGCCGGGATTATGAGAACCAGGCCGACTTCCTCGGGGTGGAAACCATGTCCAAGGCGGGCTACAACCCCCAGG
GGATGGTTTCCTTCTTCCAGAAGCTTGATACCATGGGACAACAGAATCCGAGCGCCCTCACCAAGTTCTTCTCGTCGCAT
CCCCTTACGTCGGAACGGATCCAGCGGGTTCAGGCGGAGATAGCCCAGCTTCCTCCCCGCACCTATCCGCCTGTTGACAA
TACCGACTTGCAGAAGATCAGGGCGCGTATCAAGTGA

Upstream 100 bases:

>100_bases
CCGTCATGGAGCAGGAGTGCGGCGACGGGGCTTTTTATGAAGGACGCATCCGGAGCTTCTGGGAGATCGAGGGTGACGGG
TATCTTGCATGGGAACGTGA

Downstream 100 bases:

>100_bases
TGAACGATCGGGACGAACGCTGGGACCGCATTGCCGGCAAACTGGATACTCTCCTGGACCGGTTTGATCGGTTTCTGGAC
GGTCATATTCCACCACCACC

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFTETGLKSGRRTMRFARLLLLPLIVIGTLSGCAVNMADIHGFNVISLEQEKELGTKFAAEIEKQYPVYNDPEAQKYVDR
LGRRLLTGAREVSFDYVFKVVKDDSVNAFAIPGGRLYVHTGLLKAAQSETEVAAVMAHEISHAVARHGTRQMTQQYGYSL
VLSLVLGQNSNMLAQIAGELFGKAGMMSYSRDYENQADFLGVETMSKAGYNPQGMVSFFQKLDTMGQQNPSALTKFFSSH
PLTSERIQRVQAEIAQLPPRTYPPVDNTDLQKIRARIK

Sequences:

>Translated_278_residues
MFTETGLKSGRRTMRFARLLLLPLIVIGTLSGCAVNMADIHGFNVISLEQEKELGTKFAAEIEKQYPVYNDPEAQKYVDR
LGRRLLTGAREVSFDYVFKVVKDDSVNAFAIPGGRLYVHTGLLKAAQSETEVAAVMAHEISHAVARHGTRQMTQQYGYSL
VLSLVLGQNSNMLAQIAGELFGKAGMMSYSRDYENQADFLGVETMSKAGYNPQGMVSFFQKLDTMGQQNPSALTKFFSSH
PLTSERIQRVQAEIAQLPPRTYPPVDNTDLQKIRARIK
>Mature_278_residues
MFTETGLKSGRRTMRFARLLLLPLIVIGTLSGCAVNMADIHGFNVISLEQEKELGTKFAAEIEKQYPVYNDPEAQKYVDR
LGRRLLTGAREVSFDYVFKVVKDDSVNAFAIPGGRLYVHTGLLKAAQSETEVAAVMAHEISHAVARHGTRQMTQQYGYSL
VLSLVLGQNSNMLAQIAGELFGKAGMMSYSRDYENQADFLGVETMSKAGYNPQGMVSFFQKLDTMGQQNPSALTKFFSSH
PLTSERIQRVQAEIAQLPPRTYPPVDNTDLQKIRARIK

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=269, Percent_Identity=28.996282527881, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI87081800, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI87082185, Length=251, Percent_Identity=25.8964143426295, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=193, Percent_Identity=29.0155440414508, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 30949; Mature: 30949

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTETGLKSGRRTMRFARLLLLPLIVIGTLSGCAVNMADIHGFNVISLEQEKELGTKFAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEEECHHHHHHHHHHH
EIEKQYPVYNDPEAQKYVDRLGRRLLTGAREVSFDYVFKVVKDDSVNAFAIPGGRLYVHT
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEH
GLLKAAQSETEVAAVMAHEISHAVARHGTRQMTQQYGYSLVLSLVLGQNSNMLAQIAGEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGKAGMMSYSRDYENQADFLGVETMSKAGYNPQGMVSFFQKLDTMGQQNPSALTKFFSSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PLTSERIQRVQAEIAQLPPRTYPPVDNTDLQKIRARIK
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFTETGLKSGRRTMRFARLLLLPLIVIGTLSGCAVNMADIHGFNVISLEQEKELGTKFAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCEEEEECHHHHHHHHHHH
EIEKQYPVYNDPEAQKYVDRLGRRLLTGAREVSFDYVFKVVKDDSVNAFAIPGGRLYVHT
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEH
GLLKAAQSETEVAAVMAHEISHAVARHGTRQMTQQYGYSLVLSLVLGQNSNMLAQIAGEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FGKAGMMSYSRDYENQADFLGVETMSKAGYNPQGMVSFFQKLDTMGQQNPSALTKFFSSH
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PLTSERIQRVQAEIAQLPPRTYPPVDNTDLQKIRARIK
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]