Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222441
Identifier: 78222441
GI number: 78222441
Start: 1382188
End: 1382730
Strand: Direct
Name: 78222441
Synonym: Gmet_1226
Alternate gene names: NA
Gene position: 1382188-1382730 (Clockwise)
Preceding gene: 78222440
Following gene: 78222442
Centisome position: 34.58
GC content: 58.01
Gene sequence:
>543_bases ATGACGCGCTTTGCATGCACCGTGATGATCCTGGCTCTGGCCGTGGCGGCCCAAGCCGACATATACAAGTGGGTGGACCA GCGAGGGACGGTCAACTACACTGAAGACCTTGGCAAGGTTCCCAAAAAATACCGGAAGAAAGTAACGGTTATTCCCGAAG GTGGGGCGCCTGCGGCCGAGGTGACGGAAACTGTCGTCGAGCGGGGAGGCAAAGAGAAGAAGCCGGAAACCGGGCAGAAG GAAGTTGAAAACGCACTGGCGCCGAAACAGGAAAAAAAGAAGATGGTCTACGGCGGCAAGGATGAGGATGCCTGGAAAAC CGAGTTCAGGACGCTGAGGAGTGAGATCAAAGCCAACGAGGCAGAACTCGCCGCGCGTCGTGGCCGGTTGGCCAATCCCG GCACCATGAACCGTGGCGATTTTCTGGGGGTCCAGAGGGAAGCAAAGAGGATAGAGGAGACGCTGACCGGCCTGAATACC AAGCTTAACACCCTTGAAGAGAGTGCCCAACGGGCCGGCGTGCCGCTGGAACTGCGGAAGTAG
Upstream 100 bases:
>100_bases CACTTCCATCTCCTTGCGGGACGGCATCTGGGGTGGCCGCCGGGATAGCCTCATTGTGTCCTGTCTGTGCCGAACCAACG AGATATGCGGGAGGTAACCC
Downstream 100 bases:
>100_bases GGCAAAGGAGTTTCAGTAAAGAAAAAGCCCGGAGGGGTAATCCTCCGGGCTTTTTGGTAATTGACGCCCAGCGGGGATGC TTTCTCGTATCCGTCGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTRFACTVMILALAVAAQADIYKWVDQRGTVNYTEDLGKVPKKYRKKVTVIPEGGAPAAEVTETVVERGGKEKKPETGQK EVENALAPKQEKKKMVYGGKDEDAWKTEFRTLRSEIKANEAELAARRGRLANPGTMNRGDFLGVQREAKRIEETLTGLNT KLNTLEESAQRAGVPLELRK
Sequences:
>Translated_180_residues MTRFACTVMILALAVAAQADIYKWVDQRGTVNYTEDLGKVPKKYRKKVTVIPEGGAPAAEVTETVVERGGKEKKPETGQK EVENALAPKQEKKKMVYGGKDEDAWKTEFRTLRSEIKANEAELAARRGRLANPGTMNRGDFLGVQREAKRIEETLTGLNT KLNTLEESAQRAGVPLELRK >Mature_179_residues TRFACTVMILALAVAAQADIYKWVDQRGTVNYTEDLGKVPKKYRKKVTVIPEGGAPAAEVTETVVERGGKEKKPETGQKE VENALAPKQEKKKMVYGGKDEDAWKTEFRTLRSEIKANEAELAARRGRLANPGTMNRGDFLGVQREAKRIEETLTGLNTK LNTLEESAQRAGVPLELRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20018; Mature: 19887
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFACTVMILALAVAAQADIYKWVDQRGTVNYTEDLGKVPKKYRKKVTVIPEGGAPAAE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCHHH VTETVVERGGKEKKPETGQKEVENALAPKQEKKKMVYGGKDEDAWKTEFRTLRSEIKANE HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH AELAARRGRLANPGTMNRGDFLGVQREAKRIEETLTGLNTKLNTLEESAQRAGVPLELRK HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure TRFACTVMILALAVAAQADIYKWVDQRGTVNYTEDLGKVPKKYRKKVTVIPEGGAPAAE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCHHH VTETVVERGGKEKKPETGQKEVENALAPKQEKKKMVYGGKDEDAWKTEFRTLRSEIKANE HHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH AELAARRGRLANPGTMNRGDFLGVQREAKRIEETLTGLNTKLNTLEESAQRAGVPLELRK HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA