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The map label for this gene is 78188276

Identifier: 78188276

GI number: 78188276

Start: 325140

End: 325520

Strand: Reverse

Name: 78188276

Synonym: Cag_0295

Alternate gene names: NA

Gene position: 325520-325140 (Counterclockwise)

Preceding gene: 78188278

Following gene: 78188275

Centisome position: 12.66

GC content: 44.36

Gene sequence:

>381_bases
ATGAACCCCCTTTTGCACCACCACTTTTTTAACCAAAACAGTAATGCCGTGATATTCCCCTGTGAAAAAGCCGTATGGTA
CTATTTACCACAAATTAGAGCCGATTTAGCAATTGAGTTAGTTGCAACAGGCATGACGCAATCAAGTGCGGCAAAAAAGC
TTGGCGTTACGCCTGCCGCTATTTCGCAATACATTCATAAAAAGCGTGGAATGCAGCCTAACAAAAGTGCCGAATACCTT
GCTCAAATTAAACAAGCCGTTGCTGTTATCTGTAAAGGCACGGCACCTGCTGATTTACAACGCTTGGTATGCAGTTGTTG
CCATTTGCTGCAAAAAGCCAGCGATGAACATGCAGAAGCGTGTGGTGGTGGTCAAGATTGA

Upstream 100 bases:

>100_bases
TTAACAATTTTGAACATATCGCTATGTAACAATTGTCGTTAACGGCTTTAATTATTATTCTTGCTCATGGGCAAAAGCGG
GTTACCAAAACTCTTCTTGC

Downstream 100 bases:

>100_bases
AGCTCAACTATAATATAGCCACCGAGAAGCATAGCCTTTCAATAAATTGAAACGGTCGTCAACTATGCCCATGCCATGTG
TAGTAATAAAGTGAAAAAAA

Product: transcriptional regulator-like

Products: NA

Alternate protein names: Transcriptional Regulator Fis Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator-Like; Transcriptional Regulator Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNPLLHHHFFNQNSNAVIFPCEKAVWYYLPQIRADLAIELVATGMTQSSAAKKLGVTPAAISQYIHKKRGMQPNKSAEYL
AQIKQAVAVICKGTAPADLQRLVCSCCHLLQKASDEHAEACGGGQD

Sequences:

>Translated_126_residues
MNPLLHHHFFNQNSNAVIFPCEKAVWYYLPQIRADLAIELVATGMTQSSAAKKLGVTPAAISQYIHKKRGMQPNKSAEYL
AQIKQAVAVICKGTAPADLQRLVCSCCHLLQKASDEHAEACGGGQD
>Mature_126_residues
MNPLLHHHFFNQNSNAVIFPCEKAVWYYLPQIRADLAIELVATGMTQSSAAKKLGVTPAAISQYIHKKRGMQPNKSAEYL
AQIKQAVAVICKGTAPADLQRLVCSCCHLLQKASDEHAEACGGGQD

Specific function: Unknown

COG id: COG2522

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13720; Mature: 13720

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLLHHHFFNQNSNAVIFPCEKAVWYYLPQIRADLAIELVATGMTQSSAAKKLGVTPAA
CCCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
ISQYIHKKRGMQPNKSAEYLAQIKQAVAVICKGTAPADLQRLVCSCCHLLQKASDEHAEA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
CGGGQD
CCCCCC
>Mature Secondary Structure
MNPLLHHHFFNQNSNAVIFPCEKAVWYYLPQIRADLAIELVATGMTQSSAAKKLGVTPAA
CCCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
ISQYIHKKRGMQPNKSAEYLAQIKQAVAVICKGTAPADLQRLVCSCCHLLQKASDEHAEA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
CGGGQD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA