| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188165
Identifier: 78188165
GI number: 78188165
Start: 204766
End: 205824
Strand: Reverse
Name: 78188165
Synonym: Cag_0182
Alternate gene names: NA
Gene position: 205824-204766 (Counterclockwise)
Preceding gene: 78188166
Following gene: 78188164
Centisome position: 8.0
GC content: 39.09
Gene sequence:
>1059_bases ATGAAATCAACGTATGACCCACCCTTGAGTATTACCAATACAGTGATTCATTTGATTGCCGATATTTCGGCACAAATTGA ACGCTATGCCATCCGAATGGAACAGGACGATGGACTGTTGTGGCGTAAAATTAACCGCATAAAAACCATTCAAGGGTCGT TAGCCATCGAAGGCAATAATTTAGGAACAGACCAAATTACCGCTCTACTTGAAGGCAAGCAGGTAATAGGAACCATGCGC GAAATACAAGAAGCACGCAATGCGTTAAAAACTTACGATGCTTTTTCAACATTCGATCCATACAAACAAGTTGATTTACT ACGAGCACACGGCTTATTAATGGAAGCCTTGGTTGACAATCACGGCAAATACCGTAGAGGAAATGTAGGGGTATTTGCAG GCGACAGCCCCATACACGTAGCACCGCCAGCTCACATAGTACCAAAACTCATGGACGATTTGTTTGAATGGCTAACATTC AACAACAACCATTTGTTAATAAAAAGTTGTGTGTTTCATTACGAATTTGAATTTATTCATCCCTTTATGGATGGTAATGG ACGCATAGGACGACTGTGGCAATCACTCTTGCTTGCAAAACTACATCCGATTTTTGAGTATCTGCCGGTGGAAACTATGG TTTTTAAAAACCAACAACGCTATTATCAAGCTATTAACGACAGCACCAACGTAGCCGATAGCGCTATTTTTGTTGAATTT ATGTTGGGAGAAATATTGACAACACTAAAAAACAGGCAAGGCGAACCATTACAATGTTTACCAACTAATTCTATGAGTGG GGCAGTAAATGGGGTAGTAAGTGGGGTAGTAAAAACCGTTTACGATTTTATAGAACAAAACCCTGGTTGCCGTAAACCAC AGATAGCTAAAAAAACAGAGATACCCATTAAAACTCTTGAAAAACACATTACCAAACTAAAAGCAATGAATAAAATTATA TTTGTAGGTTCCCCAAAATCAGGTGGTTATTATATAAAAATTGGTGAACAAAAAACCGTTTGGACAACCCTTGCGGTTGC CCAAAATCAAACGCAATAA
Upstream 100 bases:
>100_bases CCAAGAAATTTACAATACATAAGAAAATTTGCAGAGGCTTGGCTGAATAGTGAAGTTGTGCAACACACCGTTCGGACAAA ATGTAATGAACAGTTGAGAT
Downstream 100 bases:
>100_bases AAGGGCAGGGGCAAGCCCTGCCCCTACATTTTTTTAAATGGTTTGTCGCAATGATGAAAACAATAATGGCAATGAACGAT TATAAACCTATCATATACAC
Product: Fic family protein
Products: NA
Alternate protein names: Fic Family Protein; Cell Filamentation Protein Fic; Fic Protein Involved In; Fic Domain-Containing Protein; Fic Family Filamentation Induced By CAMP Protein; Fic Protein; Filamentation Induced By CAMP Family Protein; Regulatory Protein; Huntington Interacting Protein HYPE; Fis Family Transcriptional Regulator; Fic Protein Family Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKSTYDPPLSITNTVIHLIADISAQIERYAIRMEQDDGLLWRKINRIKTIQGSLAIEGNNLGTDQITALLEGKQVIGTMR EIQEARNALKTYDAFSTFDPYKQVDLLRAHGLLMEALVDNHGKYRRGNVGVFAGDSPIHVAPPAHIVPKLMDDLFEWLTF NNNHLLIKSCVFHYEFEFIHPFMDGNGRIGRLWQSLLLAKLHPIFEYLPVETMVFKNQQRYYQAINDSTNVADSAIFVEF MLGEILTTLKNRQGEPLQCLPTNSMSGAVNGVVSGVVKTVYDFIEQNPGCRKPQIAKKTEIPIKTLEKHITKLKAMNKII FVGSPKSGGYYIKIGEQKTVWTTLAVAQNQTQ
Sequences:
>Translated_352_residues MKSTYDPPLSITNTVIHLIADISAQIERYAIRMEQDDGLLWRKINRIKTIQGSLAIEGNNLGTDQITALLEGKQVIGTMR EIQEARNALKTYDAFSTFDPYKQVDLLRAHGLLMEALVDNHGKYRRGNVGVFAGDSPIHVAPPAHIVPKLMDDLFEWLTF NNNHLLIKSCVFHYEFEFIHPFMDGNGRIGRLWQSLLLAKLHPIFEYLPVETMVFKNQQRYYQAINDSTNVADSAIFVEF MLGEILTTLKNRQGEPLQCLPTNSMSGAVNGVVSGVVKTVYDFIEQNPGCRKPQIAKKTEIPIKTLEKHITKLKAMNKII FVGSPKSGGYYIKIGEQKTVWTTLAVAQNQTQ >Mature_352_residues MKSTYDPPLSITNTVIHLIADISAQIERYAIRMEQDDGLLWRKINRIKTIQGSLAIEGNNLGTDQITALLEGKQVIGTMR EIQEARNALKTYDAFSTFDPYKQVDLLRAHGLLMEALVDNHGKYRRGNVGVFAGDSPIHVAPPAHIVPKLMDDLFEWLTF NNNHLLIKSCVFHYEFEFIHPFMDGNGRIGRLWQSLLLAKLHPIFEYLPVETMVFKNQQRYYQAINDSTNVADSAIFVEF MLGEILTTLKNRQGEPLQCLPTNSMSGAVNGVVSGVVKTVYDFIEQNPGCRKPQIAKKTEIPIKTLEKHITKLKAMNKII FVGSPKSGGYYIKIGEQKTVWTTLAVAQNQTQ
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39737; Mature: 39737
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTYDPPLSITNTVIHLIADISAQIERYAIRMEQDDGLLWRKINRIKTIQGSLAIEGNN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECCCEEEECCC LGTDQITALLEGKQVIGTMREIQEARNALKTYDAFSTFDPYKQVDLLRAHGLLMEALVDN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC HGKYRRGNVGVFAGDSPIHVAPPAHIVPKLMDDLFEWLTFNNNHLLIKSCVFHYEFEFIH CCCEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEE PFMDGNGRIGRLWQSLLLAKLHPIFEYLPVETMVFKNQQRYYQAINDSTNVADSAIFVEF EEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MLGEILTTLKNRQGEPLQCLPTNSMSGAVNGVVSGVVKTVYDFIEQNPGCRKPQIAKKTE HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IPIKTLEKHITKLKAMNKIIFVGSPKSGGYYIKIGEQKTVWTTLAVAQNQTQ CCHHHHHHHHHHHHHHCEEEEEECCCCCCEEEEECCCCEEHHHHHHHCCCCC >Mature Secondary Structure MKSTYDPPLSITNTVIHLIADISAQIERYAIRMEQDDGLLWRKINRIKTIQGSLAIEGNN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECCCEEEECCC LGTDQITALLEGKQVIGTMREIQEARNALKTYDAFSTFDPYKQVDLLRAHGLLMEALVDN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC HGKYRRGNVGVFAGDSPIHVAPPAHIVPKLMDDLFEWLTFNNNHLLIKSCVFHYEFEFIH CCCEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEE PFMDGNGRIGRLWQSLLLAKLHPIFEYLPVETMVFKNQQRYYQAINDSTNVADSAIFVEF EEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MLGEILTTLKNRQGEPLQCLPTNSMSGAVNGVVSGVVKTVYDFIEQNPGCRKPQIAKKTE HHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IPIKTLEKHITKLKAMNKIIFVGSPKSGGYYIKIGEQKTVWTTLAVAQNQTQ CCHHHHHHHHHHHHHHCEEEEEECCCCCCEEEEECCCCEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA