Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067627
Identifier: 78067627
GI number: 78067627
Start: 3308482
End: 3309189
Strand: Reverse
Name: 78067627
Synonym: Bcep18194_A6158
Alternate gene names: NA
Gene position: 3309189-3308482 (Counterclockwise)
Preceding gene: 78067628
Following gene: 78067626
Centisome position: 89.58
GC content: 74.58
Gene sequence:
>708_bases ATGCTCGCATCCTCCATTTCTCCCGAATCCCTTCATCCGTCGCTGTGGCGCGGCTCGCAGCTCGCGCGCGGCGGTTCGCG CACGATCGAGACCGGCTTCGCGCCGCTATCCGCCGAGCTGCCGGGCGGCGGCTGGCCGGTCGGCGGGCTCGTCGAACTGC TGGCCGCGCAGCCGGGCTGCGGCGAGATGCGGCTGCTCGCGCCCGCGCTCGCACGCACCGTCAGCGCGCGGCGGCCACTC GCGCTCGTCGCGCCGCCGCAGTCGCCGCACGCGACCGCGCTCGCCAGTCTCGGCGTGCCGGCCGACGCGCTGCTGTGGCT GCGTGCCGGCAGCCACACGGATGCGTTGTGGGCTGCCGAGCAGGCGCTCAAGACCGGCTGTTGCGGCGCGCTGCTGCTGT GGCAGGACGCGCGGCCCGATGCACTGCGGCGCCTGCATCTCGCGGCCGCGCGCACGGGCGACACGCTGTTCGTGATGCTG CGCCCGCTGTCGGCCGAGCGGCAGCCGTCGCCGGCCGTGTTGCGCATCGCGCTGTACCCGGTGCCGGGCGGCGTGTCGCT CGATATCGTCAAGCGTCGCGGCCCCGCCCGCAGCGAGCCGCTCGTGCTCGACCTGCCGTCGCCCATCGTGGAGAGCCGCT ATGCGCGTCTTGCTCGGCATCCATCTGCCGCGCCTGCCGCTCGACGTGTGCGTCGCGCTTCCGTCTGA
Upstream 100 bases:
>100_bases CCGGCTGTTTATCTTCTGACGAAAACCGGTTTTGCACCGGTGCTGTGCGACGCGAGCGCATTGCCATATACTGTATATCC ATACAGTTGTGGGTGGCATC
Downstream 100 bases:
>100_bases CGGCGAGGCGGGCGAGGCCGGTGGCGCAGGCTGTGCGGTGCTCGAGCAGGGTGTCGTGCTGATCGCCGACACGGCCGCGC GCCGGCAGGGCGTGCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLASSISPESLHPSLWRGSQLARGGSRTIETGFAPLSAELPGGGWPVGGLVELLAAQPGCGEMRLLAPALARTVSARRPL ALVAPPQSPHATALASLGVPADALLWLRAGSHTDALWAAEQALKTGCCGALLLWQDARPDALRRLHLAAARTGDTLFVML RPLSAERQPSPAVLRIALYPVPGGVSLDIVKRRGPARSEPLVLDLPSPIVESRYARLARHPSAAPAARRVRRASV
Sequences:
>Translated_235_residues MLASSISPESLHPSLWRGSQLARGGSRTIETGFAPLSAELPGGGWPVGGLVELLAAQPGCGEMRLLAPALARTVSARRPL ALVAPPQSPHATALASLGVPADALLWLRAGSHTDALWAAEQALKTGCCGALLLWQDARPDALRRLHLAAARTGDTLFVML RPLSAERQPSPAVLRIALYPVPGGVSLDIVKRRGPARSEPLVLDLPSPIVESRYARLARHPSAAPAARRVRRASV >Mature_235_residues MLASSISPESLHPSLWRGSQLARGGSRTIETGFAPLSAELPGGGWPVGGLVELLAAQPGCGEMRLLAPALARTVSARRPL ALVAPPQSPHATALASLGVPADALLWLRAGSHTDALWAAEQALKTGCCGALLLWQDARPDALRRLHLAAARTGDTLFVML RPLSAERQPSPAVLRIALYPVPGGVSLDIVKRRGPARSEPLVLDLPSPIVESRYARLARHPSAAPAARRVRRASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24734; Mature: 24734
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASSISPESLHPSLWRGSQLARGGSRTIETGFAPLSAELPGGGWPVGGLVELLAAQPGC CCCCCCCCCCCCCHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC GEMRLLAPALARTVSARRPLALVAPPQSPHATALASLGVPADALLWLRAGSHTDALWAAE CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHEEEEECCCCCHHHHHHH QALKTGCCGALLLWQDARPDALRRLHLAAARTGDTLFVMLRPLSAERQPSPAVLRIALYP HHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEE VPGGVSLDIVKRRGPARSEPLVLDLPSPIVESRYARLARHPSAAPAARRVRRASV CCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLASSISPESLHPSLWRGSQLARGGSRTIETGFAPLSAELPGGGWPVGGLVELLAAQPGC CCCCCCCCCCCCCHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC GEMRLLAPALARTVSARRPLALVAPPQSPHATALASLGVPADALLWLRAGSHTDALWAAE CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCHHHEEEEECCCCCHHHHHHH QALKTGCCGALLLWQDARPDALRRLHLAAARTGDTLFVMLRPLSAERQPSPAVLRIALYP HHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEEEE VPGGVSLDIVKRRGPARSEPLVLDLPSPIVESRYARLARHPSAAPAARRVRRASV CCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA