Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
---|---|
Accession | NC_007510 |
Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is nagE [H]
Identifier: 78067620
GI number: 78067620
Start: 3296122
End: 3297891
Strand: Reverse
Name: nagE [H]
Synonym: Bcep18194_A6151
Alternate gene names: 78067620
Gene position: 3297891-3296122 (Counterclockwise)
Preceding gene: 78067621
Following gene: 78067613
Centisome position: 89.27
GC content: 67.8
Gene sequence:
>1770_bases ATGAACGGGAATCCGTTTCTGAAAATACAGGGCCTGGGCCGGGCACTGATGCTACCGATCGCGGTACTGCCGGTTGCCGG CATCCTGCTGCGACTCGGCCAGCCGGACGTGTTCAACATCAAGATGATCGCCGACGCCGGCGGCGCGATTTTCGACAACC TGCCGCTGCTGTTCGCGATCGGCGTGGCGGTCGGTTTCGCGAAGGACAACAACGGCGTCGCGGCGCTCGCGGGCGCGATC GGTTACCTGATCGAAACCGCGATCATGAAGGACATCGATCCCAAGCTGAACATGGGCGTGCTGTCCGGGATCATCGCGGG TGTGGTCGCGGGCCTGCTGTACAACCGCTATAAAGACATCAAGCTGCCGGACTACCTCGCGTTCTTCGGCGGCAAACGGT TCGTACCGATCATCACGGGGCTGGTCTGCGTGATACTCGGCATCGCGTTCGGATACGTCTGGCAGCCGGTCCAGCATCTG ATCGACGCGGCCGGCCAGTGGCTGACGACGGCGGGCGCGATCGGTGCGTTCGTGTTCGGCTTCCTGAACCGCCTGCTGCT CGTCACGGGCCTGCACCACATCCTCAACTCGCTCGCATGGTTCGTGTTCGGCAACTTCACGCCGCCCGCCGGCGGCGAGA TCGTGCACGGCGACCTGCACCGCTTCTTCGCGGGCGACCCGACCGCGGGCACCTTCATGGCCGGCTTCTTCCCGATCATG ATGTTCGGCCTGCCGGCGGCGTGTCTGGCGATGCTGCACGAAGCGCCGAAGGAACGCCGCGCGATGGTCGGCGGCCTGCT GCTGTCGATGGCGCTGACGTCGTTCCTGACCGGCGTGACCGAGCCGATCGAATTCAGCTTCATGTTCCTCGCACCGGTGC TGTACGTGATCCACGCGGTGCTGACGGGGCTGTCGCTCGCGATCTGCCAGATCCTCGGCGTGAAGCTCGGCTTCACGTTC TCGGCCGGTGCGATCGACTACGTGCTGAACTACGGGCTGTCGACGAAGGGCTGGATCGCGATTCCGCTTGGCATCGCGTA CGGCGCCGCGTACTACGGGCTGTTCCGCTTCTTCATCCGCAAGTTCAACATGGCCACGCCGGGCCGTGAGCCGGCATCGG CCGATGCGGCTGCTGAATCGTACGCATCGGGCGGCTTCGTTGCGCCGGCTGCCGGCGCCGCTGCGGTTGCCGCAGCACCG CGCGCGCAGCGCTATATCGCCGCGCTCGGCGGGGCAGGCAACCTGTCGGTCGTCGACGCGTGCACGACGCGCCTGCGCCT GACCGTCGTCGATCCGGAGAAGGTTTCGGAGCCGGAACTGAAATCGATCGGCGCGCGCGGCGTGCTCAAGCGCGGCGGCA ACAGCGTGCAGGTGATCATCGGGCCCGAGGCCGACATCATTGCCGACGAGATGCGTGCCGCCATCGGCAGCGGTGCGGCA GGCGCAGCATCGACGGCGACGGCCGCCGCCGCGCAGCCCGTCACGGGCGCGGCCGCCGGCCCGCTCGATCCGGAGCCGAC GCGCTGGCTCGCGGTGTTCGGCGGCGCGACCAACGTCGCGTCGCTCGATGCGGTTGCGACCACGCGCCTGCGTGTGGTCG TACGCGATCCGTCGGCGGTCGATCGCGATCGTCTCGGTGCGCTCGACGTCGCGTGGGTGTCGCTCGACACGTTCCACATC GTCTGCGGCAACGCGGCGGCACGCTATGCCGAGCAGCTCGGCGCGCGCCTGCCGCCGTCGGGCAGCGGGGCGGCCGTACA ACCGGCCTGA
Upstream 100 bases:
>100_bases GCCGCTCGACTGAGCGTCGACGGCAGGTTCGCGACCGGTTTCAAGACGAAAGCAATTAGGTCAACGACGATTAATGACGA GACAAGGATTGGAGGACTGA
Downstream 100 bases:
>100_bases TGCGATGAAGCCAGCCTGATCCGCAATGCGGGTTCGGGCCGGCCGGCAAAACGAAAACGGCTTGCGATGCGTCGCAAGCC GTTTTTCTTTGGTGCGGGCA
Product: PTS system, N-acetylglucosamine-specific IIBC component
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MNGNPFLKIQGLGRALMLPIAVLPVAGILLRLGQPDVFNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIETAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLVCVILGIAFGYVWQPVQHL IDAAGQWLTTAGAIGAFVFGFLNRLLLVTGLHHILNSLAWFVFGNFTPPAGGEIVHGDLHRFFAGDPTAGTFMAGFFPIM MFGLPAACLAMLHEAPKERRAMVGGLLLSMALTSFLTGVTEPIEFSFMFLAPVLYVIHAVLTGLSLAICQILGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGIAYGAAYYGLFRFFIRKFNMATPGREPASADAAAESYASGGFVAPAAGAAAVAAAP RAQRYIAALGGAGNLSVVDACTTRLRLTVVDPEKVSEPELKSIGARGVLKRGGNSVQVIIGPEADIIADEMRAAIGSGAA GAASTATAAAAQPVTGAAAGPLDPEPTRWLAVFGGATNVASLDAVATTRLRVVVRDPSAVDRDRLGALDVAWVSLDTFHI VCGNAAARYAEQLGARLPPSGSGAAVQPA
Sequences:
>Translated_589_residues MNGNPFLKIQGLGRALMLPIAVLPVAGILLRLGQPDVFNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIETAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLVCVILGIAFGYVWQPVQHL IDAAGQWLTTAGAIGAFVFGFLNRLLLVTGLHHILNSLAWFVFGNFTPPAGGEIVHGDLHRFFAGDPTAGTFMAGFFPIM MFGLPAACLAMLHEAPKERRAMVGGLLLSMALTSFLTGVTEPIEFSFMFLAPVLYVIHAVLTGLSLAICQILGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGIAYGAAYYGLFRFFIRKFNMATPGREPASADAAAESYASGGFVAPAAGAAAVAAAP RAQRYIAALGGAGNLSVVDACTTRLRLTVVDPEKVSEPELKSIGARGVLKRGGNSVQVIIGPEADIIADEMRAAIGSGAA GAASTATAAAAQPVTGAAAGPLDPEPTRWLAVFGGATNVASLDAVATTRLRVVVRDPSAVDRDRLGALDVAWVSLDTFHI VCGNAAARYAEQLGARLPPSGSGAAVQPA >Mature_589_residues MNGNPFLKIQGLGRALMLPIAVLPVAGILLRLGQPDVFNIKMIADAGGAIFDNLPLLFAIGVAVGFAKDNNGVAALAGAI GYLIETAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDIKLPDYLAFFGGKRFVPIITGLVCVILGIAFGYVWQPVQHL IDAAGQWLTTAGAIGAFVFGFLNRLLLVTGLHHILNSLAWFVFGNFTPPAGGEIVHGDLHRFFAGDPTAGTFMAGFFPIM MFGLPAACLAMLHEAPKERRAMVGGLLLSMALTSFLTGVTEPIEFSFMFLAPVLYVIHAVLTGLSLAICQILGVKLGFTF SAGAIDYVLNYGLSTKGWIAIPLGIAYGAAYYGLFRFFIRKFNMATPGREPASADAAAESYASGGFVAPAAGAAAVAAAP RAQRYIAALGGAGNLSVVDACTTRLRLTVVDPEKVSEPELKSIGARGVLKRGGNSVQVIIGPEADIIADEMRAAIGSGAA GAASTATAAAAQPVTGAAAGPLDPEPTRWLAVFGGATNVASLDAVATTRLRVVVRDPSAVDRDRLGALDVAWVSLDTFHI VCGNAAARYAEQLGARLPPSGSGAAVQPA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=472, Percent_Identity=56.1440677966102, Blast_Score=492, Evalue=1e-140, Organism=Escherichia coli, GI1787343, Length=496, Percent_Identity=43.9516129032258, Blast_Score=387, Evalue=1e-108, Organism=Escherichia coli, GI1787908, Length=523, Percent_Identity=36.9024856596558, Blast_Score=275, Evalue=5e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 61084; Mature: 61084
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNPFLKIQGLGRALMLPIAVLPVAGILLRLGQPDVFNIKMIADAGGAIFDNLPLLFAI CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCHHHHHH GVAVGFAKDNNGVAALAGAIGYLIETAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDI HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KLPDYLAFFGGKRFVPIITGLVCVILGIAFGYVWQPVQHLIDAAGQWLTTAGAIGAFVFG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FLNRLLLVTGLHHILNSLAWFVFGNFTPPAGGEIVHGDLHRFFAGDPTAGTFMAGFFPIM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHCCCCCCHHHHHHHHHHH MFGLPAACLAMLHEAPKERRAMVGGLLLSMALTSFLTGVTEPIEFSFMFLAPVLYVIHAV HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LTGLSLAICQILGVKLGFTFSAGAIDYVLNYGLSTKGWIAIPLGIAYGAAYYGLFRFFIR HHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KFNMATPGREPASADAAAESYASGGFVAPAAGAAAVAAAPRAQRYIAALGGAGNLSVVDA HHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHH CTTRLRLTVVDPEKVSEPELKSIGARGVLKRGGNSVQVIIGPEADIIADEMRAAIGSGAA HCCEEEEEEECHHHCCCCHHHHCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCC GAASTATAAAAQPVTGAAAGPLDPEPTRWLAVFGGATNVASLDAVATTRLRVVVRDPSAV CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHEEEEEEEEECCCCC DRDRLGALDVAWVSLDTFHIVCGNAAARYAEQLGARLPPSGSGAAVQPA CHHHCCCEEEEEEEECEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNGNPFLKIQGLGRALMLPIAVLPVAGILLRLGQPDVFNIKMIADAGGAIFDNLPLLFAI CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCHHHHHH GVAVGFAKDNNGVAALAGAIGYLIETAIMKDIDPKLNMGVLSGIIAGVVAGLLYNRYKDI HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KLPDYLAFFGGKRFVPIITGLVCVILGIAFGYVWQPVQHLIDAAGQWLTTAGAIGAFVFG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FLNRLLLVTGLHHILNSLAWFVFGNFTPPAGGEIVHGDLHRFFAGDPTAGTFMAGFFPIM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHCCCCCCHHHHHHHHHHH MFGLPAACLAMLHEAPKERRAMVGGLLLSMALTSFLTGVTEPIEFSFMFLAPVLYVIHAV HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LTGLSLAICQILGVKLGFTFSAGAIDYVLNYGLSTKGWIAIPLGIAYGAAYYGLFRFFIR HHHHHHHHHHHHHHHHCCEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH KFNMATPGREPASADAAAESYASGGFVAPAAGAAAVAAAPRAQRYIAALGGAGNLSVVDA HHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHH CTTRLRLTVVDPEKVSEPELKSIGARGVLKRGGNSVQVIIGPEADIIADEMRAAIGSGAA HCCEEEEEEECHHHCCCCHHHHCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCC GAASTATAAAAQPVTGAAAGPLDPEPTRWLAVFGGATNVASLDAVATTRLRVVVRDPSAV CCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHEEEEEEEEECCCCC DRDRLGALDVAWVSLDTFHIVCGNAAARYAEQLGARLPPSGSGAAVQPA CHHHCCCEEEEEEEECEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1745234 [H]