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The map label for this gene is fdx [H]

Identifier: 78067605

GI number: 78067605

Start: 3279996

End: 3280262

Strand: Reverse

Name: fdx [H]

Synonym: Bcep18194_A6136

Alternate gene names: 78067605

Gene position: 3280262-3279996 (Counterclockwise)

Preceding gene: 78067606

Following gene: 78067597

Centisome position: 88.8

GC content: 59.18

Gene sequence:

>267_bases
ATGGCTTTGATGATTACCGACGAGTGCATCAATTGCGACGTGTGCGAGCCCGAGTGCCCGAACGGCGCGATTTCGATGGG
CCCGGATATCTACGTGATCGACCCGAACAAGTGCACCGAGTGCGTCGGCCATTTCGACGAACCGCAGTGCCAGCAGGTGT
GTCCGGTCGAATGCATTCCGCGCGATCCGCAGCATGACGAATCGCACGCGCAATTGATGGAGAAGTATCACGCGTTGACC
GCCGTAAAGGGCGACGACGCGTCGTGA

Upstream 100 bases:

>100_bases
TGACCGAGAAAGTCGCTGCGATGGGAGGCCCTGTCGCGTAACGCGGCACCGGCCGGTTTCGTTGCGAAGCCGGCCGCCGG
CCTGAAGAAGTGAGATCAGT

Downstream 100 bases:

>100_bases
CCCCGCGGTGGCGCGCGTGCCCGGGTTCTTCGGCACGCACGTCACGCATCCGGACCGGCGCCGCCTGGCGCCGGTTCGTT
CATTTCAGGCCAGCAGCTCG

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MALMITDECINCDVCEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVECIPRDPQHDESHAQLMEKYHALT
AVKGDDAS

Sequences:

>Translated_88_residues
MALMITDECINCDVCEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVECIPRDPQHDESHAQLMEKYHALT
AVKGDDAS
>Mature_87_residues
ALMITDECINCDVCEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVECIPRDPQHDESHAQLMEKYHALTA
VKGDDAS

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=77, Percent_Identity=61.038961038961, Blast_Score=99, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9695; Mature: 9564

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
14.8 %Cys+Met (Translated Protein)
10.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
13.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDECINCDVCEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVECIP
CEEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCC
RDPQHDESHAQLMEKYHALTAVKGDDAS
CCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALMITDECINCDVCEPECPNGAISMGPDIYVIDPNKCTECVGHFDEPQCQQVCPVECIP
EEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCC
RDPQHDESHAQLMEKYHALTAVKGDDAS
CCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]