Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067529
Identifier: 78067529
GI number: 78067529
Start: 3200887
End: 3201300
Strand: Reverse
Name: 78067529
Synonym: Bcep18194_A6060
Alternate gene names: NA
Gene position: 3201300-3200887 (Counterclockwise)
Preceding gene: 78067530
Following gene: 78067528
Centisome position: 86.66
GC content: 66.18
Gene sequence:
>414_bases ATGAGCGGTTTGACTTCCACGACGCCGATTCCGTCCGGCGTCGTCGTGCACGCGGTGTCGCGCGTGCTCGAATTGCAGTA CCCGAACGGCGACAGTTTCCGGATTCCGTTCGAGCTAATGCGCGTGTATTCGCCGTCGGCCGAGGTGCGCGGCCACGGGC CCGGCCAGGAGACGCTGCAGACGGGCAAGCGCGAAGTGACGATCACCGCGCTCGAGGGTGTCGGCAACTACGCGCTGCAG CCGACGTTTTCCGACGGCCATTCGACCGGCATCTACTCGTGGGACCTGCTGTACGAACTGGCCACGCAGCAGGACGCGCT ATGGCGCGACTATTTCGACAAATTGAAGGCGGCGGGCGTCGAGCGCGACGCCCCGATGCAGGCGGCGAGCGCGTCGCACG GCCACTGCCACTGA
Upstream 100 bases:
>100_bases GCGTGTCCGAGGCGCTGCTGCGCTCGCGCGCAGCGCAGGCCTCGCTGCTGCACAATGCGGTTCGCGAGGAAATTCAACGC ATGACCGATTCGAGGCAGCC
Downstream 100 bases:
>100_bases AATTCGACGGCGCCCGCTCGGCGCCGTCTTGCCATTTACTGAGGATCAACGCGATGAGCAAAACCCACTTCGGCTTCGAA AGCGTCGAGGAAAACGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSGLTSTTPIPSGVVVHAVSRVLELQYPNGDSFRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQ PTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASASHGHCH
Sequences:
>Translated_137_residues MSGLTSTTPIPSGVVVHAVSRVLELQYPNGDSFRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQ PTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASASHGHCH >Mature_136_residues SGLTSTTPIPSGVVVHAVSRVLELQYPNGDSFRIPFELMRVYSPSAEVRGHGPGQETLQTGKREVTITALEGVGNYALQP TFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGVERDAPMQAASASHGHCH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14949; Mature: 14818
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTSTTPIPSGVVVHAVSRVLELQYPNGDSFRIPFELMRVYSPSAEVRGHGPGQETLQ CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHH TGKREVTITALEGVGNYALQPTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGV CCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC ERDAPMQAASASHGHCH CCCCCCCCCCCCCCCCC >Mature Secondary Structure SGLTSTTPIPSGVVVHAVSRVLELQYPNGDSFRIPFELMRVYSPSAEVRGHGPGQETLQ CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHH TGKREVTITALEGVGNYALQPTFSDGHSTGIYSWDLLYELATQQDALWRDYFDKLKAAGV CCCCEEEEEEECCCCCEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC ERDAPMQAASASHGHCH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA