Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is flbA [H]
Identifier: 78067496
GI number: 78067496
Start: 3162578
End: 3164293
Strand: Reverse
Name: flbA [H]
Synonym: Bcep18194_A6027
Alternate gene names: 78067496
Gene position: 3164293-3162578 (Counterclockwise)
Preceding gene: 78067502
Following gene: 78067488
Centisome position: 85.66
GC content: 73.08
Gene sequence:
>1716_bases ATGCGCGTATTGCGGTGCGCGCGACGCGTGCCGCGCCCACCGCTAGCCGATTCCGACTGCATGGACGATCCGACCGATAT CCTCATTCCGCTGCTTCCGCCGTTCCTCGCGCTGCTCGGGCAGGCCGCCGATGCGCAGGCGCGCGGCGAGCACGCCGCGC ACGATCTGTGGCTCGCCGCCGCCGCGCACCTGCATGCGGTCGACGCCGATGCGCTCGCGCAACTCACCGGCACGCTCGTT TCGCGGCAGCGTGCGGCCGATGCGATCGCGCTCGCCGAATGCACGGCGCGCGTGCAGCCGGGCGCGACCGCGTACTTCAA TCACGGTTACGCGCTGCAGATGGCGGGCCGGCACGCGGACGCCGTGGCGCCGTATCGCGCGGCGCTGGCGCTCGATGCCG ACCGGCCGTCGCTGCGCAACAACCTCGCGATTGCGCTGCGGCTGTCGGGCAGCGACCGCGCGGAGGAGATCGCGCTGCTC GAAGCGGCGGTGCGCGTCGATCCACGCGACGTGCAGGCGTGGATCAACCTCGTCGTCGCGCGGATCGCGACGCACGACCT GGACGCCGCGCTCGCGTGCGCCGCTCGGCTCATCGAGCTCGCGCCCGACAACGCGCTCGCGATGAACAACGTCGCGCTGG CGATGAAGGAGGCGCAGCGCTGGGGCGACGCCGAGCACTACGCGGTGCGCGCATGCGAGCTGGCGCCTGGCGACGCGTCG TTCCGTTTCAACCTGGCGATCATCCAGCTCGTGCGCGGCAACTCCGCCGCCGGCTGGCGCGGCCACGAGGCGCGCTGGGA CGGCGCGGGCGAGTTGCGCGGCCGCCGGCCGGTGCTGCCAGGCCCGCGCTGGCAGGGCGAGCCGCTCGCCGGCAAGACGC TGCTCGTGTGGGGCGAGCAGGGGCTCGGCGACGTGCTGCAGTTCTGCCGCTTCGTCGCACCGCTCGCCGAGCGCGTGCAT CGCGAGGGCGGCCGGCTCATCTGGAATACGTTCCCGCTGGTGGGCACGCTGATGCAGCGCAGCCTCGGCGCGCATGCGGA TGCGTTCAGCGCGGGCGGCGGCGTCGACCAGCTGCCGGCCTTCGATTACGAAGTACCGCTGATCGGCCTGCCGCTGATGC TCGGCATGGAGGCGTCGACGCTCGCGTCGTCAGTGCCGTACCTGCGGGCCGATCCGTCCGCGCGCGACGCGTGGCGCGCG CGGCTCGCGGGCGACCGCCGGCTGAAGGTCGGGCTCGTGTGGACCGGCAGCGCGGGGCACCAGCGCAATCCGTTCCGGCG TGTCGGGCTCGAGCGCTATGCCGACGCATTCCGCGGGATCGACGGCGTCGCGTTTTATTCGCTGCAGCCGGGCGCGGACG CGGATGTCGCGGCGGCGCGCGCGGCGGGCTTCGCGATCGAGGATGTCACGGCGGAGCTGACGAGCTTCGACGACACGGCC GCGTTCATCGGCGCGCTGGATCTGGTGATCACCGTCTGCACGTCGGTCGCGCACCTGGCGGGCGCGCTGGGCGCGCGCAC CTGGGTGCTGCTCGACGTGAATCCGCACTGGCCGTGGCTGCTCGAACGCAACGACAGCCCGTGGTATCCGACCGCGACGC TGTACCGGCAACCGGTGTTCGGCGCGTGGGCGCCGGTGATGGAGGACGTGAGCCGCGACCTGCGGCGCCTGGCCGCGCAG CCGGCTCAATCGACGGAGTCGGCCCGGCAGGCCTGA
Upstream 100 bases:
>100_bases CCCGTTCTTGCGGCCTGCGCGGGCGTGGCCGGCATGCGGCGGGCGACCGTGTGCGGCCTGTCGCGGCGCGCGTGCCGCGT GGCTTCGCGCGGGCGTTAAG
Downstream 100 bases:
>100_bases GCCGCCGGCCGGTTCACGGCCACGGGCCGCTGCCGCATGCTGGATTTGGCGGCGGCCGCCACGCACTGCGCAGCGGCCGG CCGTTGCGTCATTCCGGCTG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MRVLRCARRVPRPPLADSDCMDDPTDILIPLLPPFLALLGQAADAQARGEHAAHDLWLAAAAHLHAVDADALAQLTGTLV SRQRAADAIALAECTARVQPGATAYFNHGYALQMAGRHADAVAPYRAALALDADRPSLRNNLAIALRLSGSDRAEEIALL EAAVRVDPRDVQAWINLVVARIATHDLDAALACAARLIELAPDNALAMNNVALAMKEAQRWGDAEHYAVRACELAPGDAS FRFNLAIIQLVRGNSAAGWRGHEARWDGAGELRGRRPVLPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFVAPLAERVH REGGRLIWNTFPLVGTLMQRSLGAHADAFSAGGGVDQLPAFDYEVPLIGLPLMLGMEASTLASSVPYLRADPSARDAWRA RLAGDRRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVAFYSLQPGADADVAAARAAGFAIEDVTAELTSFDDTA AFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERNDSPWYPTATLYRQPVFGAWAPVMEDVSRDLRRLAAQ PAQSTESARQA
Sequences:
>Translated_571_residues MRVLRCARRVPRPPLADSDCMDDPTDILIPLLPPFLALLGQAADAQARGEHAAHDLWLAAAAHLHAVDADALAQLTGTLV SRQRAADAIALAECTARVQPGATAYFNHGYALQMAGRHADAVAPYRAALALDADRPSLRNNLAIALRLSGSDRAEEIALL EAAVRVDPRDVQAWINLVVARIATHDLDAALACAARLIELAPDNALAMNNVALAMKEAQRWGDAEHYAVRACELAPGDAS FRFNLAIIQLVRGNSAAGWRGHEARWDGAGELRGRRPVLPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFVAPLAERVH REGGRLIWNTFPLVGTLMQRSLGAHADAFSAGGGVDQLPAFDYEVPLIGLPLMLGMEASTLASSVPYLRADPSARDAWRA RLAGDRRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVAFYSLQPGADADVAAARAAGFAIEDVTAELTSFDDTA AFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERNDSPWYPTATLYRQPVFGAWAPVMEDVSRDLRRLAAQ PAQSTESARQA >Mature_571_residues MRVLRCARRVPRPPLADSDCMDDPTDILIPLLPPFLALLGQAADAQARGEHAAHDLWLAAAAHLHAVDADALAQLTGTLV SRQRAADAIALAECTARVQPGATAYFNHGYALQMAGRHADAVAPYRAALALDADRPSLRNNLAIALRLSGSDRAEEIALL EAAVRVDPRDVQAWINLVVARIATHDLDAALACAARLIELAPDNALAMNNVALAMKEAQRWGDAEHYAVRACELAPGDAS FRFNLAIIQLVRGNSAAGWRGHEARWDGAGELRGRRPVLPGPRWQGEPLAGKTLLVWGEQGLGDVLQFCRFVAPLAERVH REGGRLIWNTFPLVGTLMQRSLGAHADAFSAGGGVDQLPAFDYEVPLIGLPLMLGMEASTLASSVPYLRADPSARDAWRA RLAGDRRLKVGLVWTGSAGHQRNPFRRVGLERYADAFRGIDGVAFYSLQPGADADVAAARAAGFAIEDVTAELTSFDDTA AFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERNDSPWYPTATLYRQPVFGAWAPVMEDVSRDLRRLAAQ PAQSTESARQA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61532; Mature: 61532
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLRCARRVPRPPLADSDCMDDPTDILIPLLPPFLALLGQAADAQARGEHAAHDLWLAA CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHH AAHLHAVDADALAQLTGTLVSRQRAADAIALAECTARVQPGATAYFNHGYALQMAGRHAD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCC AVAPYRAALALDADRPSLRNNLAIALRLSGSDRAEEIALLEAAVRVDPRDVQAWINLVVA CCCCHHHEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RIATHDLDAALACAARLIELAPDNALAMNNVALAMKEAQRWGDAEHYAVRACELAPGDAS HHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCC FRFNLAIIQLVRGNSAAGWRGHEARWDGAGELRGRRPVLPGPRWQGEPLAGKTLLVWGEQ EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC GLGDVLQFCRFVAPLAERVHREGGRLIWNTFPLVGTLMQRSLGAHADAFSAGGGVDQLPA CHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FDYEVPLIGLPLMLGMEASTLASSVPYLRADPSARDAWRARLAGDRRLKVGLVWTGSAGH CCCCCCCCCCHHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCC QRNPFRRVGLERYADAFRGIDGVAFYSLQPGADADVAAARAAGFAIEDVTAELTSFDDTA CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHH AFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERNDSPWYPTATLYRQPVF HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHCCCCH GAWAPVMEDVSRDLRRLAAQPAQSTESARQA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MRVLRCARRVPRPPLADSDCMDDPTDILIPLLPPFLALLGQAADAQARGEHAAHDLWLAA CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHH AAHLHAVDADALAQLTGTLVSRQRAADAIALAECTARVQPGATAYFNHGYALQMAGRHAD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCC AVAPYRAALALDADRPSLRNNLAIALRLSGSDRAEEIALLEAAVRVDPRDVQAWINLVVA CCCCHHHEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH RIATHDLDAALACAARLIELAPDNALAMNNVALAMKEAQRWGDAEHYAVRACELAPGDAS HHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCC FRFNLAIIQLVRGNSAAGWRGHEARWDGAGELRGRRPVLPGPRWQGEPLAGKTLLVWGEQ EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC GLGDVLQFCRFVAPLAERVHREGGRLIWNTFPLVGTLMQRSLGAHADAFSAGGGVDQLPA CHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC FDYEVPLIGLPLMLGMEASTLASSVPYLRADPSARDAWRARLAGDRRLKVGLVWTGSAGH CCCCCCCCCCHHHHCCCHHHHHHCCCCEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCC QRNPFRRVGLERYADAFRGIDGVAFYSLQPGADADVAAARAAGFAIEDVTAELTSFDDTA CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHH AFIGALDLVITVCTSVAHLAGALGARTWVLLDVNPHWPWLLERNDSPWYPTATLYRQPVF HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHCCCCH GAWAPVMEDVSRDLRRLAAQPAQSTESARQA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]