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The map label for this gene is yieP [H]

Identifier: 78067462

GI number: 78067462

Start: 3125972

End: 3126550

Strand: Reverse

Name: yieP [H]

Synonym: Bcep18194_A5993

Alternate gene names: 78067462

Gene position: 3126550-3125972 (Counterclockwise)

Preceding gene: 78067464

Following gene: 78067460

Centisome position: 84.64

GC content: 69.95

Gene sequence:

>579_bases
ATGGAGATGTACGGCGTGAGCCGCACGGTGATGCGCGAGGCGCTGCGTACGCTCACGTCGAAGGGGCTCGTCGAGTCGCG
GCCGAAGATCGGCACGCGCGTGCGGCCGCGCGGCGTGTGGAACCTGCTCGATGCCGACTTGCTCGACTGGTACGCGCGTG
TCGCGCCGCCGCTTGCGTTCGCGCTGAAGCTGCAGGAGATGCGCGAGATGGTCGAGCCTTACGCGGCCGCGCTCGCCGCG
CGCATGCATACGCCGGAAACGTTCGACGCGATCGACGGCGCGGCGCGTGCGATGGCCGCCGCGCGCAACGTCGACGAATG
GGTGCGCGCCGACCTGCGCTTTCACCTGAGCGTGCTCGAAGCCGGCGGCAACGAACTGCTGGTGCCGCTCGGCACGTTGA
TCGATCGCACGCTCGAGGCGCAGTTGCATCTGAATGCGCGCCGCGCGGACGTGTACAACGCGTCGCTTGCCGAGCACACG
GCAGTCAGCGACGCGATCCGCGTACGCGACGAGGACGGTGCGCGTCGCGCGATGGCGGCGCTGCTCGCGGTGACGCGCGC
CCGGATCGAGATGTCGTGA

Upstream 100 bases:

>100_bases
TCGACGCGACCTGCATGGACAGACGGCCTTCCGGCTCGCCACGGCGATCCTGCGCGGCGACTACCCGCCCGAGTCGCTGT
TGCCGAGGGAACCCGACCTG

Downstream 100 bases:

>100_bases
CGGGGAGAGGGGGGCAGTGCGGCGCCGTCAGGCGTTCGCGCAGCCGCCCGGCTTGACGATGCGTTCGGTCGACGCAGGGT
ATTTCGCGAGCAGGCTCGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKIGTRVRPRGVWNLLDADLLDWYARVAPPLAFALKLQEMREMVEPYAAALAA
RMHTPETFDAIDGAARAMAAARNVDEWVRADLRFHLSVLEAGGNELLVPLGTLIDRTLEAQLHLNARRADVYNASLAEHT
AVSDAIRVRDEDGARRAMAALLAVTRARIEMS

Sequences:

>Translated_192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKIGTRVRPRGVWNLLDADLLDWYARVAPPLAFALKLQEMREMVEPYAAALAA
RMHTPETFDAIDGAARAMAAARNVDEWVRADLRFHLSVLEAGGNELLVPLGTLIDRTLEAQLHLNARRADVYNASLAEHT
AVSDAIRVRDEDGARRAMAALLAVTRARIEMS
>Mature_192_residues
MEMYGVSRTVMREALRTLTSKGLVESRPKIGTRVRPRGVWNLLDADLLDWYARVAPPLAFALKLQEMREMVEPYAAALAA
RMHTPETFDAIDGAARAMAAARNVDEWVRADLRFHLSVLEAGGNELLVPLGTLIDRTLEAQLHLNARRADVYNASLAEHT
AVSDAIRVRDEDGARRAMAALLAVTRARIEMS

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=184, Percent_Identity=34.7826086956522, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI48994955, Length=194, Percent_Identity=33.5051546391753, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 21321; Mature: 21321

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMYGVSRTVMREALRTLTSKGLVESRPKIGTRVRPRGVWNLLDADLLDWYARVAPPLAF
CCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
ALKLQEMREMVEPYAAALAARMHTPETFDAIDGAARAMAAARNVDEWVRADLRFHLSVLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGGNELLVPLGTLIDRTLEAQLHLNARRADVYNASLAEHTAVSDAIRVRDEDGARRAMAA
CCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLAVTRARIEMS
HHHHHHHHHCCC
>Mature Secondary Structure
MEMYGVSRTVMREALRTLTSKGLVESRPKIGTRVRPRGVWNLLDADLLDWYARVAPPLAF
CCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
ALKLQEMREMVEPYAAALAARMHTPETFDAIDGAARAMAAARNVDEWVRADLRFHLSVLE
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
AGGNELLVPLGTLIDRTLEAQLHLNARRADVYNASLAEHTAVSDAIRVRDEDGARRAMAA
CCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LLAVTRARIEMS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]