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The map label for this gene is intS [C]

Identifier: 78067172

GI number: 78067172

Start: 2813118

End: 2813321

Strand: Direct

Name: intS [C]

Synonym: Bcep18194_A5703

Alternate gene names: 78067172

Gene position: 2813118-2813321 (Clockwise)

Preceding gene: 78067171

Following gene: 78067175

Centisome position: 76.15

GC content: 58.33

Gene sequence:

>204_bases
ATGCCGAAGCGCGCTACCCCGCTGACCGAAATGCAGATCCGCAAGGCCAAACCGACCGAGAAACCTTATCGCCTGGCTGA
CGGAAAAGGCTTGTATCTCGAGGTCATGCCGAACGGGTCGCACAACCGGCGGATGAAGTACGGCTTCGACGGCAAAGAGA
AGCGTGCTGGCGCAGCAGTCATCCCAATCAATGTCGAGCGATGA

Upstream 100 bases:

>100_bases
AGTTCCCAACTCTTCCCAAGTTTGCCCGGTACGAGCAGCCTAACTTGGGGGCATTTTTTGGGACATGCCTCCATACCCAC
GAACTTGATGCTCCCGCGCG

Downstream 100 bases:

>100_bases
CTGCGTCGGTACGGACAATTTATTCGCGCTCTAAAAGGCAACGGTCTTTCAATTTGACGGAGCCTTTGTGCATCGCCACG
GATACCGAAAAGATAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPKRATPLTEMQIRKAKPTEKPYRLADGKGLYLEVMPNGSHNRRMKYGFDGKEKRAGAAVIPINVER

Sequences:

>Translated_67_residues
MPKRATPLTEMQIRKAKPTEKPYRLADGKGLYLEVMPNGSHNRRMKYGFDGKEKRAGAAVIPINVER
>Mature_66_residues
PKRATPLTEMQIRKAKPTEKPYRLADGKGLYLEVMPNGSHNRRMKYGFDGKEKRAGAAVIPINVER

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7613; Mature: 7482

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRATPLTEMQIRKAKPTEKPYRLADGKGLYLEVMPNGSHNRRMKYGFDGKEKRAGAAV
CCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCCEEE
IPINVER
EEEEECC
>Mature Secondary Structure 
PKRATPLTEMQIRKAKPTEKPYRLADGKGLYLEVMPNGSHNRRMKYGFDGKEKRAGAAV
CCCCCCCCCEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCCCEEE
IPINVER
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA