| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is lysN [H]
Identifier: 78067159
GI number: 78067159
Start: 2796432
End: 2797613
Strand: Direct
Name: lysN [H]
Synonym: Bcep18194_A5690
Alternate gene names: 78067159
Gene position: 2796432-2797613 (Clockwise)
Preceding gene: 78067158
Following gene: 78067160
Centisome position: 75.7
GC content: 68.87
Gene sequence:
>1182_bases ATGAATCCGAGCGACCTGCATCCGCCGCACTGGCAGCTTTCCGAACGCGCACGCAAGCTGACGAGCTCTGCAATCCGCGA AATCCTGAAGGTCACGGAACGCCCCGAGGTCATCTCGTTCGCCGGCGGCCTGCCCGCCCCTGCCACGTTCCCGGCCGAGC GCATGCGCGCCGCCGCCGATCGCGTGCTGCGCGACGCGCCGGCCGCCGCGCTCCAGTACAGCGCGACCGAAGGCTACCTG CCGCTGCGCGAATGGATCGCCGAGCGCTACAGCGTGCGCGTGTCGCAGGTGCTGATCACGACCGGCTCGCAGCAGGCGCT CGACCTGCTCGGCAAGGCGCTCGTCGATCCGGGCAGCCCGATCCTCGTCGAAACCCCCACCTACCTCGGCGCGCTGCAGT CGTTCTCGCTGTACGAGCCGCGCTACGTGCAGGTGCCGACCGACGAGCAGGGCCTGCTGCCGGACGGCCTCACGCCCGAA CTCACGCAAGGCGCGCGCCTGCTGTACGCGCAGCCGAACTTCCAGAACCCGACCGGCCGCCGCCTGCCCGTCGAGCGCCG CCGCGCGCTCGCCGCGTTCGCGCAATCGAGCCCGTTCCCGGTGCTGGAAGACGATCCGTACGGCGCGCTGAACTACCGCG GCGAGCCGCTGCCGACGATGCTGTCGATGGCGCCCGATCACATCGTGCACCTCGGCACGTTCTCGAAGGTGCTCGCACCG GGCCTGCGGATCGGCTACATCATTGCCCCCGAAGAACTCCACTTCAAGCTCGTACAGGCCAAGCAGGCCACCGACCTGCA CACGCCGACGCTCACGCAGCGCATCGCGCACGAAGTGATCAAGGACGGCTTCCTCGACGAGCACATCCCGACGATCCGCG AGCTGTACAGCGCGCAATGCGACGCGATGCTCGCCGCGCTCGAGCGCCACATGCCGGAAGGCATCACGTGGAACCGCCCG GAAGGCGGGATGTTCATCTGGGTGAACCTGCCCGCGCAGATCGACAGCATGAAGCTGCTCGCCACGGCCGTCGACAACCA CGTCGCCTTCGTGCCGGGCGCGCCGTTCTTCGCGGACAACGCGCAACAGAACACGCTGCGCCTGTCGTTCGTGACGGTGC CGCCCGAGAAGATCGAGGAAGGCGTCGCGCGCCTCGGCAAGCTGCTGCGCGAGCGTCTCTGA
Upstream 100 bases:
>100_bases CGAAGGCTCGATCGCGCTCGTGCCTGCCCACCCGGCAGCGTCGAAGCGATTTGCCCGAACGACCTTTCTTGACTGACCAC GATATCCGAACGAGGAGACT
Downstream 100 bases:
>100_bases TCCCCTTTTTCCTGTCACGACTCTCTACGAGGAATCGAATACATGGCTAACGTCTACGACAAACTCAAGTCGCTCGGCAT CGAGCTCCCGACCGCCGGCG
Product: aminotransferase, class I and II
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALVDPGSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPDGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQSSPFPVLEDDPYGALNYRGEPLPTMLSMAPDHIVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLAALERHMPEGITWNRP EGGMFIWVNLPAQIDSMKLLATAVDNHVAFVPGAPFFADNAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Sequences:
>Translated_393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALVDPGSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPDGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQSSPFPVLEDDPYGALNYRGEPLPTMLSMAPDHIVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLAALERHMPEGITWNRP EGGMFIWVNLPAQIDSMKLLATAVDNHVAFVPGAPFFADNAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL >Mature_393_residues MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAADRVLRDAPAAALQYSATEGYL PLREWIAERYSVRVSQVLITTGSQQALDLLGKALVDPGSPILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPDGLTPE LTQGARLLYAQPNFQNPTGRRLPVERRRALAAFAQSSPFPVLEDDPYGALNYRGEPLPTMLSMAPDHIVHLGTFSKVLAP GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQCDAMLAALERHMPEGITWNRP EGGMFIWVNLPAQIDSMKLLATAVDNHVAFVPGAPFFADNAQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=410, Percent_Identity=30.4878048780488, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI33469970, Length=410, Percent_Identity=30.4878048780488, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI1787710, Length=381, Percent_Identity=28.0839895013123, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1790797, Length=336, Percent_Identity=28.5714285714286, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788722, Length=343, Percent_Identity=25.6559766763848, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994949, Length=227, Percent_Identity=27.3127753303965, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321236, Length=485, Percent_Identity=23.9175257731959, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321000, Length=264, Percent_Identity=28.7878787878788, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321929, Length=489, Percent_Identity=23.3128834355828, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356535, Length=392, Percent_Identity=26.530612244898, Blast_Score=132, Evalue=3e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 43521; Mature: 43521
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHH RVLRDAPAAALQYSATEGYLPLREWIAERYSVRVSQVLITTGSQQALDLLGKALVDPGSP HHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCCC ILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPDGLTPELTQGARLLYAQPNFQNPTGR EEEECCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC RLPVERRRALAAFAQSSPFPVLEDDPYGALNYRGEPLPTMLSMAPDHIVHLGTFSKVLAP CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEEEHHHHHHHHCC GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQC CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DAMLAALERHMPEGITWNRPEGGMFIWVNLPAQIDSMKLLATAVDNHVAFVPGAPFFADN HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCC AQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPSDLHPPHWQLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMRAAAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHH RVLRDAPAAALQYSATEGYLPLREWIAERYSVRVSQVLITTGSQQALDLLGKALVDPGSP HHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHCCCCCC ILVETPTYLGALQSFSLYEPRYVQVPTDEQGLLPDGLTPELTQGARLLYAQPNFQNPTGR EEEECCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCC RLPVERRRALAAFAQSSPFPVLEDDPYGALNYRGEPLPTMLSMAPDHIVHLGTFSKVLAP CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHEEEHHHHHHHHCC GLRIGYIIAPEELHFKLVQAKQATDLHTPTLTQRIAHEVIKDGFLDEHIPTIRELYSAQC CCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DAMLAALERHMPEGITWNRPEGGMFIWVNLPAQIDSMKLLATAVDNHVAFVPGAPFFADN HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCC AQQNTLRLSFVTVPPEKIEEGVARLGKLLRERL CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA