Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067120
Identifier: 78067120
GI number: 78067120
Start: 2749048
End: 2749995
Strand: Direct
Name: 78067120
Synonym: Bcep18194_A5651
Alternate gene names: NA
Gene position: 2749048-2749995 (Clockwise)
Preceding gene: 78067119
Following gene: 78067121
Centisome position: 74.42
GC content: 67.09
Gene sequence:
>948_bases ATGCAGCCGGCCCGGCGTTACAATGCCGGGCTGCCCGCGCCGCGTGCCTGCCCGACCGGCGGCGCCACGCGCCGCCCGCC ACGACGACTACCGAATCCGACCGCCATGTTCTCCATCATCATTCCGACCTGGAACAACCTGCCGTACCTCAAGCTCGTCG TCGACAGCCTGCGCCGCCACTCCGCGTACGACCACCAGATCATCGTGCACGTGAACGACGGCTCGGACGGCACGCTCGAC TGGGTGCGCAGCGAAGGCATCGAGCACACCGCGTCGCCGACCAACATCGGTATCTGCCACGCGGTGAACTGGGCCGCCGC GCGCGCGACGCGCGACTACGTCGTCTACATGAACGACGACATGTTCTGCTGCCCCGGTTGGGACACGGCGCTCGTGCGCC GCATCGAGCAGATGCCGACCGACCTCTTCATGCTGTCGGGCACGATGGTCGAGCCGGTCGACACGCGCAACCCGTGCGTG GTGGTCAGCAATTTCGGCCGCGACGCCGAAAACTTCGACGCGGCGGGACTCGTCGCGGCAGCCCCGAAGCTCGTGCGCGC GGACTGGCTCGGCTCGACCTGGCCGCCGACGCTCGTGCATCGCGACTGGTGGAACCGGATCGGCGGCTACAGCAGCGAGC TGTCGCCCGGCATGAGCAGCGACAACGACTTCTCGATGAAATTCTGGGACGCCGGCTGCCGGATCTTCGTCGGGGTCGGC GACAGCCTCGTCTACCACTTCCAGCAGAAAAGCACGGGCAAGATCGTCAAGAACGACGGTCGCCGCCAGTTCCTGAACAA ATGGGGCATGACCCAGGCGACGTTCGACCGCTATTTCCTGCATCGTGGCGAACCGGCCGGCACGCGCGTCGCGCTCGACA CGCCGGCAGTTGAAGGACGCCTGAAGCGCGCACTGCTGCGCTCGCGGATCAAGCGCGCGTTCAGCTGA
Upstream 100 bases:
>100_bases GGCCGCGCCGGCTTCATGATCGCCGTGTTCAACGCGGAAACCGTGTACTACCGCTTCCTGAAGCTCGGCCACGAACGGGC GCGCTGAGCACCCGCCCGGC
Downstream 100 bases:
>100_bases TCAAGCCCCGAAAACGACACGGAAACGCGCCCTGCTTCGCGTATACTCTGCGCCGTTCGTCCCGGATCTCCCGCCGGGGC GCGCGGCGCGCAGCACGACG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Group 2 Family Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQPARRYNAGLPAPRACPTGGATRRPPRRLPNPTAMFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLD WVRSEGIEHTASPTNIGICHAVNWAAARATRDYVVYMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMVEPVDTRNPCV VVSNFGRDAENFDAAGLVAAAPKLVRADWLGSTWPPTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFVGVG DSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATFDRYFLHRGEPAGTRVALDTPAVEGRLKRALLRSRIKRAFS
Sequences:
>Translated_315_residues MQPARRYNAGLPAPRACPTGGATRRPPRRLPNPTAMFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLD WVRSEGIEHTASPTNIGICHAVNWAAARATRDYVVYMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMVEPVDTRNPCV VVSNFGRDAENFDAAGLVAAAPKLVRADWLGSTWPPTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFVGVG DSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATFDRYFLHRGEPAGTRVALDTPAVEGRLKRALLRSRIKRAFS >Mature_315_residues MQPARRYNAGLPAPRACPTGGATRRPPRRLPNPTAMFSIIIPTWNNLPYLKLVVDSLRRHSAYDHQIIVHVNDGSDGTLD WVRSEGIEHTASPTNIGICHAVNWAAARATRDYVVYMNDDMFCCPGWDTALVRRIEQMPTDLFMLSGTMVEPVDTRNPCV VVSNFGRDAENFDAAGLVAAAPKLVRADWLGSTWPPTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFVGVG DSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATFDRYFLHRGEPAGTRVALDTPAVEGRLKRALLRSRIKRAFS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35355; Mature: 35355
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPARRYNAGLPAPRACPTGGATRRPPRRLPNPTAMFSIIIPTWNNLPYLKLVVDSLRRH CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SAYDHQIIVHVNDGSDGTLDWVRSEGIEHTASPTNIGICHAVNWAAARATRDYVVYMNDD CCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCCCCEEEEECCC MFCCPGWDTALVRRIEQMPTDLFMLSGTMVEPVDTRNPCVVVSNFGRDAENFDAAGLVAA EEEECCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH APKLVRADWLGSTWPPTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFVGVG CCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC DSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATFDRYFLHRGEPAGTRVALDTPAVEGR CHHEEEECCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHH LKRALLRSRIKRAFS HHHHHHHHHHHHHCC >Mature Secondary Structure MQPARRYNAGLPAPRACPTGGATRRPPRRLPNPTAMFSIIIPTWNNLPYLKLVVDSLRRH CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SAYDHQIIVHVNDGSDGTLDWVRSEGIEHTASPTNIGICHAVNWAAARATRDYVVYMNDD CCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCCCCEEEEECCC MFCCPGWDTALVRRIEQMPTDLFMLSGTMVEPVDTRNPCVVVSNFGRDAENFDAAGLVAA EEEECCCCHHHHHHHHHCCCCEEEECCCEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH APKLVRADWLGSTWPPTLVHRDWWNRIGGYSSELSPGMSSDNDFSMKFWDAGCRIFVGVG CCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECC DSLVYHFQQKSTGKIVKNDGRRQFLNKWGMTQATFDRYFLHRGEPAGTRVALDTPAVEGR CHHEEEECCCCCCCEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHH LKRALLRSRIKRAFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA