| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067064
Identifier: 78067064
GI number: 78067064
Start: 2693723
End: 2694481
Strand: Direct
Name: 78067064
Synonym: Bcep18194_A5595
Alternate gene names: NA
Gene position: 2693723-2694481 (Clockwise)
Preceding gene: 78067063
Following gene: 78067065
Centisome position: 72.92
GC content: 71.81
Gene sequence:
>759_bases GTGAGTCAGAAGCGCGGCCTGGCCGTATTTTTCGGATGCGTAATCGCGATCGCCGTTTCCTACGTCGCCACTTACCCACG ATTCCGCCCGGCCCCCGCGACGACCACCGCCGCGGCCAGCAGCCCTGCCGCGCCCGCATCGGCCGCGACCGGGCTGACCA CCGAACTCCCCCCGCTCCCCCTGCCGCTGCCGGCCGCTACCGGCCCGCTGTCGTGGGCACGCCTCACGCCGGCGCAGCAC GCGGCACTCGCGCCGTTCGCCGACCAGTGGGACGGCTTCAGCGATGCCCGCAAGCGCAAATGGCTGAAGATCGCGTCGCG TTTCGCGAAGTTGACGCCCGATGATCAGAAGCGCCTGCAAGACCGGATGACCGAATGGGCAAAGATGACGCCCGAGCAGC GCCGCGTCGCGCGCGAGAATTACCAGAGTGCGAAGGAGCTTTCCGCGCAGGCTCGCGAGCGTGCATGGAAGGCGTACCAG CAACTCCCCGAAGAGCAGAAGGAACGTCTCGCGGCCGCCGAGCGCCGCCGCCGGCCGAGCGTCGTCAGTGCGCCGCCGAC CGTCGCCGACCGTGACGTCCGTCGCCTCGTCAATTCGCACGAACACCCGGCAAGCGGCCCGGCCACCGCACCGGCGCCCG TCTCGGCCGCCGTCGCGCCGCCGGTGCCCGCCTCGTCGACGGCCGGCACCGCATCCGCGCCGGCCGCCGTGGCGCCCGTG TCGCCCGCCGACGCACCCTCGCTGTTCAAGGGTTCCTGA
Upstream 100 bases:
>100_bases TGCTCAGCGACGACCTGCCGCTCAACGCGTATCTCGATCACGGGTTCAACGCGTATCTGTCGCGCGCTCACTAACAGACA ATAACGAGGGGATCGCACGG
Downstream 100 bases:
>100_bases GCGCCCGTGGCGAACGCCCGCGCACCCGAAATTCCGGCCGCCGCGCCATCCGTGCGGCGGCGTCTCGCTGCCCTGCTCTA CGAAGGCGTGCTGCTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSQKRGLAVFFGCVIAIAVSYVATYPRFRPAPATTTAAASSPAAPASAATGLTTELPPLPLPLPAATGPLSWARLTPAQH AALAPFADQWDGFSDARKRKWLKIASRFAKLTPDDQKRLQDRMTEWAKMTPEQRRVARENYQSAKELSAQARERAWKAYQ QLPEEQKERLAAAERRRRPSVVSAPPTVADRDVRRLVNSHEHPASGPATAPAPVSAAVAPPVPASSTAGTASAPAAVAPV SPADAPSLFKGS
Sequences:
>Translated_252_residues MSQKRGLAVFFGCVIAIAVSYVATYPRFRPAPATTTAAASSPAAPASAATGLTTELPPLPLPLPAATGPLSWARLTPAQH AALAPFADQWDGFSDARKRKWLKIASRFAKLTPDDQKRLQDRMTEWAKMTPEQRRVARENYQSAKELSAQARERAWKAYQ QLPEEQKERLAAAERRRRPSVVSAPPTVADRDVRRLVNSHEHPASGPATAPAPVSAAVAPPVPASSTAGTASAPAAVAPV SPADAPSLFKGS >Mature_251_residues SQKRGLAVFFGCVIAIAVSYVATYPRFRPAPATTTAAASSPAAPASAATGLTTELPPLPLPLPAATGPLSWARLTPAQHA ALAPFADQWDGFSDARKRKWLKIASRFAKLTPDDQKRLQDRMTEWAKMTPEQRRVARENYQSAKELSAQARERAWKAYQQ LPEEQKERLAAAERRRRPSVVSAPPTVADRDVRRLVNSHEHPASGPATAPAPVSAAVAPPVPASSTAGTASAPAAVAPVS PADAPSLFKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26814; Mature: 26682
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKRGLAVFFGCVIAIAVSYVATYPRFRPAPATTTAAASSPAAPASAATGLTTELPPLP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCC LPLPAATGPLSWARLTPAQHAALAPFADQWDGFSDARKRKWLKIASRFAKLTPDDQKRLQ CCCCCCCCCCCHHHCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH DRMTEWAKMTPEQRRVARENYQSAKELSAQARERAWKAYQQLPEEQKERLAAAERRRRPS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC VVSAPPTVADRDVRRLVNSHEHPASGPATAPAPVSAAVAPPVPASSTAGTASAPAAVAPV CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPADAPSLFKGS CCCCCCCCCCCC >Mature Secondary Structure SQKRGLAVFFGCVIAIAVSYVATYPRFRPAPATTTAAASSPAAPASAATGLTTELPPLP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCC LPLPAATGPLSWARLTPAQHAALAPFADQWDGFSDARKRKWLKIASRFAKLTPDDQKRLQ CCCCCCCCCCCHHHCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH DRMTEWAKMTPEQRRVARENYQSAKELSAQARERAWKAYQQLPEEQKERLAAAERRRRPS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC VVSAPPTVADRDVRRLVNSHEHPASGPATAPAPVSAAVAPPVPASSTAGTASAPAAVAPV CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPADAPSLFKGS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA