| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067053
Identifier: 78067053
GI number: 78067053
Start: 2682158
End: 2682670
Strand: Direct
Name: 78067053
Synonym: Bcep18194_A5584
Alternate gene names: NA
Gene position: 2682158-2682670 (Clockwise)
Preceding gene: 78067025
Following gene: 78067054
Centisome position: 72.61
GC content: 64.72
Gene sequence:
>513_bases ATGCGCATTCGCATTTCCGCGCGCCTGCCGGTGCTGTTCGCCAGCGCCGCCGCGCTGCTGGCCGGTTGCGCGCAACCGTG GCAGCAATACCAGGCCGGCCAGGACGAGTCGGCGATCGTCGCACGCATGGGCCCGCCGCGCGAGATCTACGACCTGCCCG GCGGCGGCAAGCGCCTGATGTGGCCGACCCAGCCGATGGGCGAAATCACCATCGCGGCCGACGTCGACGCGGCCCACAAG ATCGTCAACGTGCGCCAGGTCCTGCAGCCGAACGAGTTCTATCGCGCAGAGATCGGCAAATGGACGAAGACCGATGTGCT CGTCAACTTCGGACGCCCCGTCGAGACGTCCTACTTCCCGCTGATGAAGCGCGAGGTGTGGACCTATCGGTATCTCGAGG ACAACGTCTGGTACATGATGTACAGCTTCTACTTCGATCCGCAGGGCATCCTGCGCATCACGCAGAAAACGCCCGACCCG CTGCACGATCCAGACCGCCGCAACCTGTTCTGA
Upstream 100 bases:
>100_bases CGGCGCGCCCGGCGATCCGCACCGATTTTTTCCTCGCGGTGCGCGGCCGCGCGCCGTCCGTGATAAAACGGGACTTGTTT CCGTGTTCTGGAGAATCCCC
Downstream 100 bases:
>100_bases CCGATTACGCATTTACGCGCAATTTTCATCATGGCCATTCACGAATCATTGCGTGAATGGCCATTTCCTTTTTTCCGCTT TCCTATTAATTCGGCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP LHDPDRRNLF
Sequences:
>Translated_170_residues MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP LHDPDRRNLF >Mature_170_residues MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP LHDPDRRNLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19669; Mature: 19669
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLM CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEEE WPTQPMGEITIAADVDAAHKIVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFP CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCH LMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDPLHDPDRRNLF HHHHHHHEEEEECCCEEEEEEEEEECCHHEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLM CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEEE WPTQPMGEITIAADVDAAHKIVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFP CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCH LMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDPLHDPDRRNLF HHHHHHHEEEEECCCEEEEEEEEEECCHHEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA