Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78067053

Identifier: 78067053

GI number: 78067053

Start: 2682158

End: 2682670

Strand: Direct

Name: 78067053

Synonym: Bcep18194_A5584

Alternate gene names: NA

Gene position: 2682158-2682670 (Clockwise)

Preceding gene: 78067025

Following gene: 78067054

Centisome position: 72.61

GC content: 64.72

Gene sequence:

>513_bases
ATGCGCATTCGCATTTCCGCGCGCCTGCCGGTGCTGTTCGCCAGCGCCGCCGCGCTGCTGGCCGGTTGCGCGCAACCGTG
GCAGCAATACCAGGCCGGCCAGGACGAGTCGGCGATCGTCGCACGCATGGGCCCGCCGCGCGAGATCTACGACCTGCCCG
GCGGCGGCAAGCGCCTGATGTGGCCGACCCAGCCGATGGGCGAAATCACCATCGCGGCCGACGTCGACGCGGCCCACAAG
ATCGTCAACGTGCGCCAGGTCCTGCAGCCGAACGAGTTCTATCGCGCAGAGATCGGCAAATGGACGAAGACCGATGTGCT
CGTCAACTTCGGACGCCCCGTCGAGACGTCCTACTTCCCGCTGATGAAGCGCGAGGTGTGGACCTATCGGTATCTCGAGG
ACAACGTCTGGTACATGATGTACAGCTTCTACTTCGATCCGCAGGGCATCCTGCGCATCACGCAGAAAACGCCCGACCCG
CTGCACGATCCAGACCGCCGCAACCTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCCCGGCGATCCGCACCGATTTTTTCCTCGCGGTGCGCGGCCGCGCGCCGTCCGTGATAAAACGGGACTTGTTT
CCGTGTTCTGGAGAATCCCC

Downstream 100 bases:

>100_bases
CCGATTACGCATTTACGCGCAATTTTCATCATGGCCATTCACGAATCATTGCGTGAATGGCCATTTCCTTTTTTCCGCTT
TCCTATTAATTCGGCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein; Transmembrane Lipoprotein; Exported Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK
IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP
LHDPDRRNLF

Sequences:

>Translated_170_residues
MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK
IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP
LHDPDRRNLF
>Mature_170_residues
MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLMWPTQPMGEITIAADVDAAHK
IVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFPLMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDP
LHDPDRRNLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19669; Mature: 19669

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLM
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEEE
WPTQPMGEITIAADVDAAHKIVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFP
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCH
LMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDPLHDPDRRNLF
HHHHHHHEEEEECCCEEEEEEEEEECCHHEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIRISARLPVLFASAAALLAGCAQPWQQYQAGQDESAIVARMGPPREIYDLPGGGKRLM
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCEEE
WPTQPMGEITIAADVDAAHKIVNVRQVLQPNEFYRAEIGKWTKTDVLVNFGRPVETSYFP
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCH
LMKREVWTYRYLEDNVWYMMYSFYFDPQGILRITQKTPDPLHDPDRRNLF
HHHHHHHEEEEECCCEEEEEEEEEECCHHEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA