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The map label for this gene is 78066996

Identifier: 78066996

GI number: 78066996

Start: 2621806

End: 2622537

Strand: Direct

Name: 78066996

Synonym: Bcep18194_A5527

Alternate gene names: NA

Gene position: 2621806-2622537 (Clockwise)

Preceding gene: 78066995

Following gene: 78066997

Centisome position: 70.97

GC content: 68.99

Gene sequence:

>732_bases
ATGCAGGCTTCGCATCTCGCTCCTGCCGGCGCCGTGCCGGCTGCACCACGTATGAATCCCCGAGTGATCGTCGTCGCGGT
CGGTGTGCTTGCCGCACACGCGATCATGCTGACGGCCGCCTGGCTCCATCGCAACGCGCCGCCGCCGCCGAAGGAGATCG
AGGTTCAGTCGATCACCGCGCAGCTCATTCCGCCTGCGCCCCCTGCCCAGCCCGTCGCGGTCCAGTCGGCCGCGCAGCAG
CCTACGCCGCCCAAGCTCACGCCGCGCGTGAAGCCGAAGGTCGAGCCGAAGCCGGTGCAGAAAGCAGTCCTGACGCCTAA
GCCGGTCTCGCAGGCACCGTCGCCGACACCCGCGCCGGCCGTTGCCGATCCGACACCGGCCCCCGCCGCGCCGGCGCCTG
CTGCACCGGCTGCAGCCCCCGGCCCGGCGCGCGAGACGATGCAGGTCAGCGCGCCGAAGAACGTGTCGGCGCTCACCTGC
AATTTCGTCAAGCCGACCTATCCGTCGATGTCGCGCCGTCGCGGCGAAACGGGCACGGCCTATGTTCACTTCATCATCGG
CGTGACGGGCAAGATCGAAAGCGTCCAGCTTCAGAAGAGCAGCGGCTACCCGCGTCTCGATGAAGCCGCACTCGAGGCGA
CGCGCGCCAGCACCTGCCCGCCGTATCTCGAGAACGGCCAGGCGATCCGCGCCGCCCATACGCTGCCCTTCAACTTCACG
CTTGACGACTAA

Upstream 100 bases:

>100_bases
CGGATTTGTGACCACCGTTTGCATCTCGCTGCTGATCTTCCGCAAGTGATGCCGATTCACCCGCCGCGCCCCGGGTGCGA
CATCGTTCTTTCAAGCTAAC

Downstream 100 bases:

>100_bases
CCCGTCATATTCGGTAGATTCAAAGGAAATAAGAAAATGCAAAGCTACGGTATCGCGCACGTCTGGGCGCAAGGTGATTT
CGTCACGCGCGCCATCGCGA

Product: TonB-like protein

Products: NA

Alternate protein names: NB Protein; NB-Like Protein; NB Domain Protein; NB-Like; NB Like Protein; Periplasmic Protein nB

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQASHLAPAGAVPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPPKEIEVQSITAQLIPPAPPAQPVAVQSAAQQ
PTPPKLTPRVKPKVEPKPVQKAVLTPKPVSQAPSPTPAPAVADPTPAPAAPAPAAPAAAPGPARETMQVSAPKNVSALTC
NFVKPTYPSMSRRRGETGTAYVHFIIGVTGKIESVQLQKSSGYPRLDEAALEATRASTCPPYLENGQAIRAAHTLPFNFT
LDD

Sequences:

>Translated_243_residues
MQASHLAPAGAVPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPPKEIEVQSITAQLIPPAPPAQPVAVQSAAQQ
PTPPKLTPRVKPKVEPKPVQKAVLTPKPVSQAPSPTPAPAVADPTPAPAAPAPAAPAAAPGPARETMQVSAPKNVSALTC
NFVKPTYPSMSRRRGETGTAYVHFIIGVTGKIESVQLQKSSGYPRLDEAALEATRASTCPPYLENGQAIRAAHTLPFNFT
LDD
>Mature_243_residues
MQASHLAPAGAVPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPPKEIEVQSITAQLIPPAPPAQPVAVQSAAQQ
PTPPKLTPRVKPKVEPKPVQKAVLTPKPVSQAPSPTPAPAVADPTPAPAAPAPAAPAAAPGPARETMQVSAPKNVSALTC
NFVKPTYPSMSRRRGETGTAYVHFIIGVTGKIESVQLQKSSGYPRLDEAALEATRASTCPPYLENGQAIRAAHTLPFNFT
LDD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25252; Mature: 25252

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASHLAPAGAVPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPPKEIEVQSITA
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
QLIPPAPPAQPVAVQSAAQQPTPPKLTPRVKPKVEPKPVQKAVLTPKPVSQAPSPTPAPA
EECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
VADPTPAPAAPAPAAPAAAPGPARETMQVSAPKNVSALTCNFVKPTYPSMSRRRGETGTA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCCCCE
YVHFIIGVTGKIESVQLQKSSGYPRLDEAALEATRASTCPPYLENGQAIRAAHTLPFNFT
EEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCEEEE
LDD
ECC
>Mature Secondary Structure
MQASHLAPAGAVPAAPRMNPRVIVVAVGVLAAHAIMLTAAWLHRNAPPPPKEIEVQSITA
CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
QLIPPAPPAQPVAVQSAAQQPTPPKLTPRVKPKVEPKPVQKAVLTPKPVSQAPSPTPAPA
EECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
VADPTPAPAAPAPAAPAAAPGPARETMQVSAPKNVSALTCNFVKPTYPSMSRRRGETGTA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCCCCE
YVHFIIGVTGKIESVQLQKSSGYPRLDEAALEATRASTCPPYLENGQAIRAAHTLPFNFT
EEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCEEEE
LDD
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA