| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is murI [H]
Identifier: 78066994
GI number: 78066994
Start: 2620340
End: 2621200
Strand: Direct
Name: murI [H]
Synonym: Bcep18194_A5525
Alternate gene names: 78066994
Gene position: 2620340-2621200 (Clockwise)
Preceding gene: 78066993
Following gene: 78066995
Centisome position: 70.93
GC content: 69.57
Gene sequence:
>861_bases ATGTCGACATCTTCCGTTATTGCAGCGACGGCTTCGACCGTCGCCCCCATCGGCATCTTCGATTCAGGGCTGGGCGGCCT GTCGGTGCTGCGCGCCGTGCGCGCGCAGCTGCCCGACGAATCGTTCATCTACGTCGCCGATTCGCACCATGCGCCGTATG GTCCGCGCGATGAGGCGTTCATTACGGAACGCACGCTGGCAATCGGCGAGTGGCTGGCCCGCGAAGGAGCGAAAGCGCTC GTCATCGCCTGCAATACCGCAACCGCACGCGCGATCGCCGCGACCCGCGAACACCTGTCGATGCCGCTCGTCGGCGTCGA GCCGGGCATCAAGCCGGCCGCCGCCGTGTCCGCGAGCGGCGTCGCGGGCGTCCTGGCCACGCAGTCGACGCTGAACAGTC CGCGCTTCCAGGCGCTGCTCGACCGCTACGGCGCCGGCCGCCGCTTCATCTGCCAGCCCGGCCACGGGCTCGTCGAGGCC ATCGAGCGCGGCGACACGAATTCGCCCGCCTTGCGCGCGTTGCTCGACAGCTACCTGCAACCGATGCTCGACGACGGCGC CGATACGCTGGTACTCGGCTGCACGCATTACCCGTTCTTCACGGAAACGATTCGTGACCTTGTGGGCGATCGCCTGACGC TCGTCGACACCAGCGACGCGATCGCGCGCCAGCTCGTGCGGGTGCTCGACGAGCGCCACCTGCGCGCACCGGCCGGCACG CGCGCGGCACCGCCCCGCTTCTGCTCGACTAGCGACGGTCGCCAACTGCAGGCGCTCGCGTCGACGCTGCTCGGCCTCGC TGCGCCGGTCGAATCCGTCACCATTTCCTCGCCGAACGCGCGCGCCTGCGCGACCGCCTGA
Upstream 100 bases:
>100_bases CCTGATCGGCAAGGTCGGCCTGCAGAACTACCAGCAAACGATGATGGGGTCGCCGGAGTAAACTCACTCCACGCTTCCCG TTATCGCCCCCAGCCCGTTC
Downstream 100 bases:
>100_bases CACGGGCCGGCACGCCCTGCTCCGCGTGCCGATCCACCCCCTCGACGTTTCAAGGGTCCGATGACCTTAAAAAAAGCCCG CCCCAGGCTTGTCAACGTCC
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSTSSVIAATASTVAPIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAIGEWLAREGAKAL VIACNTATARAIAATREHLSMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEA IERGDTNSPALRALLDSYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGT RAAPPRFCSTSDGRQLQALASTLLGLAAPVESVTISSPNARACATA
Sequences:
>Translated_286_residues MSTSSVIAATASTVAPIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAIGEWLAREGAKAL VIACNTATARAIAATREHLSMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEA IERGDTNSPALRALLDSYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGT RAAPPRFCSTSDGRQLQALASTLLGLAAPVESVTISSPNARACATA >Mature_285_residues STSSVIAATASTVAPIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAIGEWLAREGAKALV IACNTATARAIAATREHLSMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAI ERGDTNSPALRALLDSYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGTR AAPPRFCSTSDGRQLQALASTLLGLAAPVESVTISSPNARACATA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=232, Percent_Identity=37.9310344827586, Blast_Score=133, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29984; Mature: 29853
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSVIAATASTVAPIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAF CCCCHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHH ITERTLAIGEWLAREGAKALVIACNTATARAIAATREHLSMPLVGVEPGIKPAAAVSASG HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCC VAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLDSYLQ HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHH PMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGT HHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCC RAAPPRFCSTSDGRQLQALASTLLGLAAPVESVTISSPNARACATA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC >Mature Secondary Structure STSSVIAATASTVAPIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAF CCCHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHH ITERTLAIGEWLAREGAKALVIACNTATARAIAATREHLSMPLVGVEPGIKPAAAVSASG HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCC VAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTNSPALRALLDSYLQ HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHH PMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGT HHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCC RAAPPRFCSTSDGRQLQALASTLLGLAAPVESVTISSPNARACATA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]