| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066966
Identifier: 78066966
GI number: 78066966
Start: 2585255
End: 2586442
Strand: Direct
Name: 78066966
Synonym: Bcep18194_A5497
Alternate gene names: NA
Gene position: 2585255-2586442 (Clockwise)
Preceding gene: 78066965
Following gene: 78066967
Centisome position: 69.98
GC content: 71.8
Gene sequence:
>1188_bases ATGCCCATCGCGCTGGCGCCCGGCGACCCGGCCGCGCACGACGGTTTCGACGACGCCGCATGGACGGCGCGCGAACTCAG CGCGTGGCTCGGGCTCGTCTATCAGGGCCCGTCGGAACCGACCCCGTGGGGCGGCTTCCTCGAAGCGGTCCGCGCGCGGC TCGACGCGAGCTTCACGACCCTGGTGCTGCGCAATCCGGGCAGCGCACGGCACGGGCTCATCATCAATGCATCGGCGCAG GGCCCGCTGCTGCCCGGCGAACCGTCGTACAGCGAGCAGTTCTACGCGCTGTGCCCGTTTCTCGACCAGCCCCCCGGCCA GGTCTTCACGGCCGACCGGCTGTTCGGCGAAACCGCGTGGTGCGCGCACGATTTCTACCGGCAGTACCTGCAGCCGCTCG ACCTGCGCTACATCCTCGGCGCGAACCTGCGCGGCGAACGCGGCGTCGAATGCGCGTTCTTCGTGAGCCGCGCGCACGGC GGCCGCGATTTCGATGCGGCCGAGCGCGCGCAGGTCGCGACGCTGCTGCCGCACCTGCAGCGGGCGGTCGAACTGCACGC GGCCTTCGACGTGCTCGATGCCGAACGCGCGCTGTACGCGGGCACCGTCGACCGGCTCGACGTCGGCACAGCGATCGTCG ACGAGGACGGCCGCGTGATCAAGCGCAACCGCATCGCCGAGCGGCTGATCGAGCAGCAGGACGGGCTGTGCGTGCGCCAG GAGCGGCTCCACGCGTCGTGTCCGCTCGATGAGCGCCGGCTGCAGAAGGCGCTGCAGGCCGCGCTCGAGCATTTCCGCGC GGGCGCGCTCGCCCGCATCGAAGCCACCACGCTGTCGCGCCCCGGCGGCGCGATGCCGTTGAGTGTGCTGCTGCGCCCGC TCGCGCCCTACCGCGGTGCGGAGGACCGCCAGCACCGGCCGGCCGTCGCGGTGTTCGTCCGCGATCCGGCGTCGTCGCCG CAGACGTCGCGCGACATGCTGCACCGGTTGTTCCGGCTCACGCCGATGGAAACCGAAATCGCGCTGCTGCTCGTCGACGG GCTGACGCTCGACGAGGCGGCCGCCGCGACCGGCATCACGAAGAACACCGCGCGCGCGCACCTGCGCGGCATCTTCGCGA AAACGGGCGCGACGCGGCAGGCCGTGCTCGTGAAGACGCTGCTCAACAGCGTCGTGTCGATGGCATAG
Upstream 100 bases:
>100_bases CCGCTCGCCCGCGTCGCCTACTCCGTTCGGATGACGCGGGCCGCCAGCCGGCCGGTATGCTGGTCCGGGAATCCTTCATC CCGACCAGGAGAACACAAGC
Downstream 100 bases:
>100_bases CAACCGCACCGGCAGCCTCGCGACGGGCTGCCCGGTCGATGCATCGCGCGCGGGTCGCGACCGAAACCACGAAAATCGGC TCGCACTCATTTCATGTCAT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Protein; CheY-Like Receiver; LuxR-Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptionat Regulator LuxR Family
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MPIALAPGDPAAHDGFDDAAWTARELSAWLGLVYQGPSEPTPWGGFLEAVRARLDASFTTLVLRNPGSARHGLIINASAQ GPLLPGEPSYSEQFYALCPFLDQPPGQVFTADRLFGETAWCAHDFYRQYLQPLDLRYILGANLRGERGVECAFFVSRAHG GRDFDAAERAQVATLLPHLQRAVELHAAFDVLDAERALYAGTVDRLDVGTAIVDEDGRVIKRNRIAERLIEQQDGLCVRQ ERLHASCPLDERRLQKALQAALEHFRAGALARIEATTLSRPGGAMPLSVLLRPLAPYRGAEDRQHRPAVAVFVRDPASSP QTSRDMLHRLFRLTPMETEIALLLVDGLTLDEAAAATGITKNTARAHLRGIFAKTGATRQAVLVKTLLNSVVSMA
Sequences:
>Translated_395_residues MPIALAPGDPAAHDGFDDAAWTARELSAWLGLVYQGPSEPTPWGGFLEAVRARLDASFTTLVLRNPGSARHGLIINASAQ GPLLPGEPSYSEQFYALCPFLDQPPGQVFTADRLFGETAWCAHDFYRQYLQPLDLRYILGANLRGERGVECAFFVSRAHG GRDFDAAERAQVATLLPHLQRAVELHAAFDVLDAERALYAGTVDRLDVGTAIVDEDGRVIKRNRIAERLIEQQDGLCVRQ ERLHASCPLDERRLQKALQAALEHFRAGALARIEATTLSRPGGAMPLSVLLRPLAPYRGAEDRQHRPAVAVFVRDPASSP QTSRDMLHRLFRLTPMETEIALLLVDGLTLDEAAAATGITKNTARAHLRGIFAKTGATRQAVLVKTLLNSVVSMA >Mature_394_residues PIALAPGDPAAHDGFDDAAWTARELSAWLGLVYQGPSEPTPWGGFLEAVRARLDASFTTLVLRNPGSARHGLIINASAQG PLLPGEPSYSEQFYALCPFLDQPPGQVFTADRLFGETAWCAHDFYRQYLQPLDLRYILGANLRGERGVECAFFVSRAHGG RDFDAAERAQVATLLPHLQRAVELHAAFDVLDAERALYAGTVDRLDVGTAIVDEDGRVIKRNRIAERLIEQQDGLCVRQE RLHASCPLDERRLQKALQAALEHFRAGALARIEATTLSRPGGAMPLSVLLRPLAPYRGAEDRQHRPAVAVFVRDPASSPQ TSRDMLHRLFRLTPMETEIALLLVDGLTLDEAAAATGITKNTARAHLRGIFAKTGATRQAVLVKTLLNSVVSMA
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43179; Mature: 43048
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIALAPGDPAAHDGFDDAAWTARELSAWLGLVYQGPSEPTPWGGFLEAVRARLDASFTT CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEE LVLRNPGSARHGLIINASAQGPLLPGEPSYSEQFYALCPFLDQPPGQVFTADRLFGETAW EEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHCCHHH CAHDFYRQYLQPLDLRYILGANLRGERGVECAFFVSRAHGGRDFDAAERAQVATLLPHLQ HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH RAVELHAAFDVLDAERALYAGTVDRLDVGTAIVDEDGRVIKRNRIAERLIEQQDGLCVRQ HHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEHH ERLHASCPLDERRLQKALQAALEHFRAGALARIEATTLSRPGGAMPLSVLLRPLAPYRGA HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHCCCCCCC EDRQHRPAVAVFVRDPASSPQTSRDMLHRLFRLTPMETEIALLLVDGLTLDEAAAATGIT CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCC KNTARAHLRGIFAKTGATRQAVLVKTLLNSVVSMA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIALAPGDPAAHDGFDDAAWTARELSAWLGLVYQGPSEPTPWGGFLEAVRARLDASFTT CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEE LVLRNPGSARHGLIINASAQGPLLPGEPSYSEQFYALCPFLDQPPGQVFTADRLFGETAW EEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHCCHHH CAHDFYRQYLQPLDLRYILGANLRGERGVECAFFVSRAHGGRDFDAAERAQVATLLPHLQ HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH RAVELHAAFDVLDAERALYAGTVDRLDVGTAIVDEDGRVIKRNRIAERLIEQQDGLCVRQ HHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEHH ERLHASCPLDERRLQKALQAALEHFRAGALARIEATTLSRPGGAMPLSVLLRPLAPYRGA HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCHHHHHHHCCCCCCC EDRQHRPAVAVFVRDPASSPQTSRDMLHRLFRLTPMETEIALLLVDGLTLDEAAAATGIT CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCC KNTARAHLRGIFAKTGATRQAVLVKTLLNSVVSMA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA