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The map label for this gene is recJ [H]

Identifier: 78066891

GI number: 78066891

Start: 2490949

End: 2492646

Strand: Direct

Name: recJ [H]

Synonym: Bcep18194_A5422

Alternate gene names: 78066891

Gene position: 2490949-2492646 (Clockwise)

Preceding gene: 78066890

Following gene: 78066892

Centisome position: 67.43

GC content: 70.97

Gene sequence:

>1698_bases
ATGACCCGGATCGTTACCCGCCCCGTCGCGCCCGCCGACGCCGAAGTGCTCGCGCGCCACGGCCTGCATCCCGTCCTTGC
GCGCCTGTACGCGTCGCGCGGCGTGCAGTCCCCCGCCGACATCGAGACCGCGCTCGCGCGGCTCGTTCCGCCCACCGAGC
TGAAAGGCTGCGCCGACGCGGCATCGCTGCTCGCCGACGCGATCGCCGACAAGCGGCGCCTGCTGGTCGTCGCCGACTAT
GACTGCGACGGCGCAACCGCCTGCGCGGTCGCGGTGCGCGGCCTGCGGATGTTCGGCGCGCAGATCGACTACCTGGTGCC
GAACCGTTTCGAATACGGCTACGGCCTCACGCCCGAGATCGTCGAACTCGCGGCCGCGCGCAAGCCCGACCTGCTGATCA
CCGTCGACAACGGGATCGCGAGCGTCGCGGGCGTCGAGGCCGCGAACGCACGCGGCATCGACGTGCTCGTGACCGACCAC
CACCTGCCCGGCGACGCATTGCCCGCCGCGCGCGCGATCGTCAACCCGAACCAGCCCGGCTGCGTGTTCCCGAGCAAGCA
CCTCGCCGGCGTCGGCGTGATGTTCTACGTGCTGCTCGCGCTGCGCGCCGAGCTGCGCCGCCGCGGCGCGTTCGCGAGCA
AGGAAGCCGAGCCGCGCCTCGACGGCCTGCTCGACCTCGTCGCGCTCGGCACCGTCGCCGACGTCGTGCGGCTCGACGGC
AACAACCGCGTGCTCGTCGCACAGGGGCTGCAGCGCATCCGCAACGGCCGCATGCAGCCGGGCATCGCCGCGCTGTTCCG
CGCGGCCGCACGCGAAGCGCGCACGGCGTCGGGCTTCGACCTCGGCTTCGGCCTCGGCCCGCGCCTGAACGCCGCCGGGC
GGCTCTCCGACATGTCGCTCGGCATCGAGTGCCTGATCACCGACGACATCGGCCGCGCGTGGGATCTCGCGCAGCAACTC
GACGTGATGAACCGCGAACGCCGCGAGATCGAGGCCGGCATGCAACAGCAGGCGCTCGCCGATCTCGCCGACGTCGATCC
CGCCGACGCGTGCACGATCACCCTCTTCAACCCCGAGTGGCACCAGGGCGTGATCGGCATCGTCGCCGGCCGGCTCAAGG
AAAAATTCCACCGCCCGTCGTTCACGTTCGCGCACGCGGACGACGAAGGCAAGCGGGTCAAGGGGTCGGGCCGCTCGATT
CCCGGCTTCCACCTGCGCGACGCGCTCGACCTCGTGTCGAAGCGCGAACCGGACCTGATCGTCGCGTTCGGCGGCCACGC
GATGGCGGCCGGCCTCACGCTCGACACCGAGAACGTGCCGCGCTTCGCGGCCGCGTTCGAGGCCGTCGCGCGCGAATGGC
TGTCCGACGACGCGCTCGCCCGCGTGATCGAGACCGACGGCGAACTCGAGGACGCATATTTCACGCCGCAGTTCGTCGGG
CTGCTCGACGAGGCCGTCTGGGGGCAAGGTTTTCCGGCCCCGCTTTTCTCGGGCGAATTCGACGTCGTGTCGCAGTCGCT
CGTGAAGGAAAAGCATCTGAAGCTGCAGCTGGCGCGCGGCCGGCAGCGCTTCAACGCGATCTGGTTCAACCACACGGAGC
CGCTGCCGGAGAGCGCGCTGGTCGCATACCGCCTCGTCGCCGACACGTGGAACGGCGTCACGCGCGTCCAGCTGATCGTC
GAACACGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
ACACGAGCTCCGTAACGCTGCACGCGACGCGCGGCGACCTGCGCAAGTTCTGGCGCCGCCGCGCGCTGGCCTCCCTGTTC
GAATAACAAGCAGACCCCGT

Downstream 100 bases:

>100_bases
GCGCGGGCCGCCCGGCCTGCGCAGCCCGCCGAGGCATGCACGCCGCGCCGGACGGGGCCGCGGCGCGCGTGCGAGCACCG
TTTGCGTCACCGGGCAACCC

Product: RecJ exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADAASLLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCVFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSI
PGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESALVAYRLVADTWNGVTRVQLIV
EHAAG

Sequences:

>Translated_565_residues
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADAASLLADAIADKRRLLVVADY
DCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDH
HLPGDALPAARAIVNPNQPGCVFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQL
DVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSI
PGFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESALVAYRLVADTWNGVTRVQLIV
EHAAG
>Mature_564_residues
TRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADAASLLADAIADKRRLLVVADYD
CDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHH
LPGDALPAARAIVNPNQPGCVFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDGN
NRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSLGIECLITDDIGRAWDLAQQLD
VMNRERREIEAGMQQQALADLADVDPADACTITLFNPEWHQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIP
GFHLRDALDLVSKREPDLIVAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVGL
LDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESALVAYRLVADTWNGVTRVQLIVE
HAAG

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=554, Percent_Identity=48.9169675090253, Blast_Score=490, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60972; Mature: 60841

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADA
CCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ASLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CVFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIPGFHLRDALDLVSKREPDLI
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCEEEECEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHH
VAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADA
CCEECCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHH
ASLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
CVFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIPGFHLRDALDLVSKREPDLI
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEE
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
EEECCCEEEECEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESAL
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHH
VAYRLVADTWNGVTRVQLIVEHAAG
HHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]