Click here to switch to the map view.

The map label for this gene is yrdA [C]

Identifier: 78066878

GI number: 78066878

Start: 2476574

End: 2477098

Strand: Direct

Name: yrdA [C]

Synonym: Bcep18194_A5409

Alternate gene names: 78066878

Gene position: 2476574-2477098 (Clockwise)

Preceding gene: 78066867

Following gene: 78066879

Centisome position: 67.04

GC content: 64.19

Gene sequence:

>525_bases
GTGACGATCTACAAGCTGGGCGATACGGCCCCGACGATCCACGAAAGCGTATTCGTCGCCGATACGGCGGCCATCATCGG
CAAGGTCGTGCTCGAGGAGAACGCGAGCGTCTGGTTCGGCGCGACGATTCGCGGCGACAACGAGACGATCACCGTCGGTG
CGGGCAGCAACGTCCAGGAAGGCGCGGTCCTGCATACGGACCCCGGCTTTCCGCTGACGATTGCCGAAAACGTGACGATC
GGGCACCAGGCCATGCTGCACGGCTGCACGATCGGCGAAGGTTCGCTGGTCGGTATCCAGGCGGTGGTCTTGAATGGAGC
GGTCATTGGCCGCAACTGTCTGGTTGGTGCCGGCGCGGTCGTGACGGAAGGCAAGACGTTCCCGGACAACTCGCTGATTC
TCGGCGCACCGGCGAAAGTCGTGCGCGAGCTGTCGGCGGAAGACATTGCGCGGCTGCGCACGAACGCGCAGACGTACGTC
GAGCGGCGTGCGCATTTCAAGGAGCAACTCGTGCGGATCGGGTGA

Upstream 100 bases:

>100_bases
GTTTACAATAGGCGATTGTTCCGCGGCGCATGCGAATGCGCCGGGCAAACCAGACGCGCCATTCTACCGGCGCCCTTCAT
CGAAGAGACAAGGAGACTCC

Downstream 100 bases:

>100_bases
TTCGCACGGATTTCAAGGAAGAAGAGTGAGCGACCAGTTACAGAAATTCATGTTCAATGCGGCGCCCGTGCGCGGCGAGA
TCGTTTCGCTGCGCAATACG

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTIYKLGDTAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDIARLRTNAQTYV
ERRAHFKEQLVRIG

Sequences:

>Translated_174_residues
MTIYKLGDTAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTI
GHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDIARLRTNAQTYV
ERRAHFKEQLVRIG
>Mature_173_residues
TIYKLGDTAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQEGAVLHTDPGFPLTIAENVTIG
HQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAVVTEGKTFPDNSLILGAPAKVVRELSAEDIARLRTNAQTYVE
RRAHFKEQLVRIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=39.6449704142012, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=42.1383647798742, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI87081681, Length=161, Percent_Identity=36.6459627329193, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18230; Mature: 18099

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYKLGDTAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQE
CEEEECCCCCCCHHHEEEEEHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKTFPDNSLILGAPAKVVRELSAEDIARLRTNAQTYVERRAHFKEQLVRIG
EECCCCCCCCCEEEECHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIYKLGDTAPTIHESVFVADTAAIIGKVVLEENASVWFGATIRGDNETITVGAGSNVQE
EEEECCCCCCCHHHEEEEEHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEECCCCCCC
GAVLHTDPGFPLTIAENVTIGHQAMLHGCTIGEGSLVGIQAVVLNGAVIGRNCLVGAGAV
CEEEEECCCCCEEEECCCEECCHHHEEECCCCCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKTFPDNSLILGAPAKVVRELSAEDIARLRTNAQTYVERRAHFKEQLVRIG
EECCCCCCCCCEEEECHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]