| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yceG [C]
Identifier: 78066663
GI number: 78066663
Start: 2239271
End: 2240290
Strand: Reverse
Name: yceG [C]
Synonym: Bcep18194_A5194
Alternate gene names: 78066663
Gene position: 2240290-2239271 (Counterclockwise)
Preceding gene: 78066666
Following gene: 78066662
Centisome position: 60.64
GC content: 66.18
Gene sequence:
>1020_bases ATGTCCCTACTGAAGAAATGCGCCGCGACGATCGTGGCGCTGGCCGTCGTTGTGGCCGCTGCCGGCGCGGGCGGCGGATA TTACTGGGCAACCCGGCCACTGCTGCTGGGTTCGGCATCGCTCGACGTCACGATCAAGCCGCGCAGCAGCGTGAAGAGCG TTGCGCTCCAGTTGAAGCGCGGCGGCGTGCCGGTCGAGCCGCTCGGCTTTGTCGCGATGACGCGCGTGCTCGGGCTGTCG AGCCGGCTCAAGTCCGGCAACTACGAATTCAAGACCGGCATCACGCCATACGAGGTCCTGCAGAAGATCGCGCGCGGCGA CGTGAACGAGTACGTCGCGACGGTCATCGAAGGCTGGACCTTCAAGCGGATGCGCGCGGAACTCGACTCGAACCCCGATC TTGCGCACGCGACGGCCGGCATGAGCGACGCCGAGCTGCTGCGCGCGATCGGCGCGTCGGACAACGCGGTGCAGCGCGGC AGCGGCGAGGGGCTGTTCTTTCCCGATACCTATCTGTTCGACAAGGGTACGAGCGACCTGAACATCTACCGGCGCGCGTA CCATCTGATGCAGACGCGTCTCGACGAGGCCTGGGCCGCGCGCGTGCCGGGCTTGCCGTACAAGACACCTTACGAAGCGC TGACGATCGCGTCGATCGTCGAGAAGGAAACGGGCCACGCGGCCGATCGCGCGTTCGTTGCGGCCGTGTTCGCGAACCGG CTGCGCATCGGCATGCCGCTGCAGACCGATCCGTCGGTGATCTACGGGCTCGGCGATGCGTACGACGGCCGGCTGCGCAA GCGCGACCTGCAAGCGGACACTCCTTACAATACCTACACCCGACGCGGGCTGCCGCCGACGCCGATCGCGTTGCCGGGCG TGGCCGCGCTGCAGGCGGCGATCAATCCGGCACAGACGAGCGCGCTCTATTTCGTCGCGAAAGGCGATGGCACGAGCGTG TTCTCGGACACGCTCGGCGACCACAACAAGGCCGTGGACAAGTACATACGAGGTCAATAA
Upstream 100 bases:
>100_bases GGTGAAGCGAACGGTGTGCTCATGGAATGAGGGAACAGTCAACCCTGACTTTGACGGAGGCGAGCAAGTATTATATGGGT CTTACCTGAGTCACGTTTCC
Downstream 100 bases:
>100_bases TGGCGAGCGGTAAATTCATCACGTTCGAAGGCATCGACGGGGCGGGGAAGACCACCCACCTGCAATGGTTCTGCGAACGC CTCCAGGGCAAGCTGGCCGC
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLLKKCAATIVALAVVVAAAGAGGGYYWATRPLLLGSASLDVTIKPRSSVKSVALQLKRGGVPVEPLGFVAMTRVLGLS SRLKSGNYEFKTGITPYEVLQKIARGDVNEYVATVIEGWTFKRMRAELDSNPDLAHATAGMSDAELLRAIGASDNAVQRG SGEGLFFPDTYLFDKGTSDLNIYRRAYHLMQTRLDEAWAARVPGLPYKTPYEALTIASIVEKETGHAADRAFVAAVFANR LRIGMPLQTDPSVIYGLGDAYDGRLRKRDLQADTPYNTYTRRGLPPTPIALPGVAALQAAINPAQTSALYFVAKGDGTSV FSDTLGDHNKAVDKYIRGQ
Sequences:
>Translated_339_residues MSLLKKCAATIVALAVVVAAAGAGGGYYWATRPLLLGSASLDVTIKPRSSVKSVALQLKRGGVPVEPLGFVAMTRVLGLS SRLKSGNYEFKTGITPYEVLQKIARGDVNEYVATVIEGWTFKRMRAELDSNPDLAHATAGMSDAELLRAIGASDNAVQRG SGEGLFFPDTYLFDKGTSDLNIYRRAYHLMQTRLDEAWAARVPGLPYKTPYEALTIASIVEKETGHAADRAFVAAVFANR LRIGMPLQTDPSVIYGLGDAYDGRLRKRDLQADTPYNTYTRRGLPPTPIALPGVAALQAAINPAQTSALYFVAKGDGTSV FSDTLGDHNKAVDKYIRGQ >Mature_338_residues SLLKKCAATIVALAVVVAAAGAGGGYYWATRPLLLGSASLDVTIKPRSSVKSVALQLKRGGVPVEPLGFVAMTRVLGLSS RLKSGNYEFKTGITPYEVLQKIARGDVNEYVATVIEGWTFKRMRAELDSNPDLAHATAGMSDAELLRAIGASDNAVQRGS GEGLFFPDTYLFDKGTSDLNIYRRAYHLMQTRLDEAWAARVPGLPYKTPYEALTIASIVEKETGHAADRAFVAAVFANRL RIGMPLQTDPSVIYGLGDAYDGRLRKRDLQADTPYNTYTRRGLPPTPIALPGVAALQAAINPAQTSALYFVAKGDGTSVF SDTLGDHNKAVDKYIRGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=322, Percent_Identity=38.1987577639752, Blast_Score=209, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36491; Mature: 36360
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKKCAATIVALAVVVAAAGAGGGYYWATRPLLLGSASLDVTIKPRSSVKSVALQLKR CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCEEEEECCHHHHHHHHHHHHC GGVPVEPLGFVAMTRVLGLSSRLKSGNYEFKTGITPYEVLQKIARGDVNEYVATVIEGWT CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCH FKRMRAELDSNPDLAHATAGMSDAELLRAIGASDNAVQRGSGEGLFFPDTYLFDKGTSDL HHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEECCCCCHH NIYRRAYHLMQTRLDEAWAARVPGLPYKTPYEALTIASIVEKETGHAADRAFVAAVFANR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LRIGMPLQTDPSVIYGLGDAYDGRLRKRDLQADTPYNTYTRRGLPPTPIALPGVAALQAA HHCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH INPAQTSALYFVAKGDGTSVFSDTLGDHNKAVDKYIRGQ CCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure SLLKKCAATIVALAVVVAAAGAGGGYYWATRPLLLGSASLDVTIKPRSSVKSVALQLKR HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCEEEEECCHHHHHHHHHHHHC GGVPVEPLGFVAMTRVLGLSSRLKSGNYEFKTGITPYEVLQKIARGDVNEYVATVIEGWT CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCH FKRMRAELDSNPDLAHATAGMSDAELLRAIGASDNAVQRGSGEGLFFPDTYLFDKGTSDL HHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCEEECCCCCHH NIYRRAYHLMQTRLDEAWAARVPGLPYKTPYEALTIASIVEKETGHAADRAFVAAVFANR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LRIGMPLQTDPSVIYGLGDAYDGRLRKRDLQADTPYNTYTRRGLPPTPIALPGVAALQAA HHCCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH INPAQTSALYFVAKGDGTSVFSDTLGDHNKAVDKYIRGQ CCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]