Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is yahD [C]

Identifier: 78066659

GI number: 78066659

Start: 2235928

End: 2236638

Strand: Reverse

Name: yahD [C]

Synonym: Bcep18194_A5190

Alternate gene names: 78066659

Gene position: 2236638-2235928 (Counterclockwise)

Preceding gene: 78066660

Following gene: 78066658

Centisome position: 60.55

GC content: 65.82

Gene sequence:

>711_bases
ATGACGAAGCCGACCAATCATCTGCCGAAACGTGCACTCGTTGCTGCCGCGCTCGTCGCGAGCGGCCTGTTCGCGGCAGC
CGGCGCGCATGCCGAATCGCTCGATGCGATCGTCAAGGCCGTCAAGTTCGACGACATCGCCGACATCGGCAAGCAGCTCA
AGAGCGGCAAGCTCGACCCGAACACGATCGCGCCGAACGGCGACCCGCTGATCGTGATCGCCGCGCGCGAGAAGTCCGAC
AAGGTTGCGGCGGCGCTCGCCACGACGCCGAACGTCGACCTCGAGAAGGAGGACAAGGCCGGCGAAACCGCGCTGATGCT
CGCGTCGCTGAACGGCGACGTCGGCCTCGCGAAACTGCTGATCGACAAGGGCGCGGAAGTCAGCAAGAAGGGCTGGGCGC
CGCTGCACTACGCGGCGACCAACGGCCAGGACGCCGTGGTGAAGCTGCTGCTCGACCACGACGCGTACATCGATACCGCA
TCGCCGAACGGCACGACGCCGCTGATGATGGCCGCACGCGGCAACCATCCGTCGACGGTCACGCTGCTGCTCGACCAGGG
CGCCGATCCGCAGGTGAAGAACCAGCTCGGCATCACCGCGCTCGAATTCGCGAAGCACTACAACGCGCCGGACGCGATCG
AGATCCTGAGCAAGCGGACGACGCGCATCGGGGCATCGACGCCGGCAGATGCGCAAAAGAGTGCAAAATGA

Upstream 100 bases:

>100_bases
GCGCTCGCCGATGCGACGACACAGAACTTTTTCCGGCTGTTCAAGATCGCCCGCTAACGACGTGCGCGCAGCCGACAACC
CAGGGAAGGAGCCCACAACA

Downstream 100 bases:

>100_bases
CGGTTTTCGGTGCGGCAGACGATGCCCGCCCGGCCGGATTCCGGCCGGAGCAGGGCGTCCGGGCGCCGCGCCGGCCAAGG
CAGCAGGCGGCCTCGGGCCG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTKPTNHLPKRALVAAALVASGLFAAAGAHAESLDAIVKAVKFDDIADIGKQLKSGKLDPNTIAPNGDPLIVIAAREKSD
KVAAALATTPNVDLEKEDKAGETALMLASLNGDVGLAKLLIDKGAEVSKKGWAPLHYAATNGQDAVVKLLLDHDAYIDTA
SPNGTTPLMMAARGNHPSTVTLLLDQGADPQVKNQLGITALEFAKHYNAPDAIEILSKRTTRIGASTPADAQKSAK

Sequences:

>Translated_236_residues
MTKPTNHLPKRALVAAALVASGLFAAAGAHAESLDAIVKAVKFDDIADIGKQLKSGKLDPNTIAPNGDPLIVIAAREKSD
KVAAALATTPNVDLEKEDKAGETALMLASLNGDVGLAKLLIDKGAEVSKKGWAPLHYAATNGQDAVVKLLLDHDAYIDTA
SPNGTTPLMMAARGNHPSTVTLLLDQGADPQVKNQLGITALEFAKHYNAPDAIEILSKRTTRIGASTPADAQKSAK
>Mature_235_residues
TKPTNHLPKRALVAAALVASGLFAAAGAHAESLDAIVKAVKFDDIADIGKQLKSGKLDPNTIAPNGDPLIVIAAREKSDK
VAAALATTPNVDLEKEDKAGETALMLASLNGDVGLAKLLIDKGAEVSKKGWAPLHYAATNGQDAVVKLLLDHDAYIDTAS
PNGTTPLMMAARGNHPSTVTLLLDQGADPQVKNQLGITALEFAKHYNAPDAIEILSKRTTRIGASTPADAQKSAK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI30425444, Length=161, Percent_Identity=33.5403726708075, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI38569428, Length=145, Percent_Identity=35.1724137931034, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI38569426, Length=145, Percent_Identity=35.1724137931034, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI148596917, Length=131, Percent_Identity=36.6412213740458, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI70780357, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI215598574, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI52426737, Length=153, Percent_Identity=37.2549019607843, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI70780353, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI70780355, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI188595682, Length=153, Percent_Identity=37.2549019607843, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI70780359, Length=152, Percent_Identity=35.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI32967601, Length=151, Percent_Identity=35.7615894039735, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI30089994, Length=167, Percent_Identity=33.5329341317365, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI38176283, Length=167, Percent_Identity=33.5329341317365, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI52426735, Length=153, Percent_Identity=37.2549019607843, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI121582655, Length=201, Percent_Identity=29.8507462686567, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI268607595, Length=174, Percent_Identity=31.6091954022989, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI62988328, Length=174, Percent_Identity=31.6091954022989, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI157739945, Length=136, Percent_Identity=36.0294117647059, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI157266328, Length=123, Percent_Identity=34.1463414634146, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI24233530, Length=150, Percent_Identity=38.6666666666667, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI28605137, Length=112, Percent_Identity=36.6071428571429, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI68131557, Length=159, Percent_Identity=37.1069182389937, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI4506217, Length=112, Percent_Identity=36.6071428571429, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI56676397, Length=124, Percent_Identity=38.7096774193548, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI87239981, Length=137, Percent_Identity=35.7664233576642, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI41055989, Length=130, Percent_Identity=35.3846153846154, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI156142184, Length=123, Percent_Identity=34.9593495934959, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI19924156, Length=153, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI304361760, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI304361757, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI42734375, Length=111, Percent_Identity=36.9369369369369, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI56550047, Length=193, Percent_Identity=27.4611398963731, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI12746412, Length=110, Percent_Identity=33.6363636363636, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI59850762, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809476, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809472, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809470, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809468, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809478, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI224809474, Length=134, Percent_Identity=35.0746268656716, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI30348954, Length=192, Percent_Identity=29.6875, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4506499, Length=135, Percent_Identity=34.0740740740741, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7657265, Length=147, Percent_Identity=36.0544217687075, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46519154, Length=142, Percent_Identity=36.6197183098592, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI46519151, Length=142, Percent_Identity=36.6197183098592, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI18079216, Length=134, Percent_Identity=31.3432835820896, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI225543463, Length=168, Percent_Identity=30.3571428571429, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI256574792, Length=114, Percent_Identity=35.0877192982456, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI41327754, Length=138, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI38683807, Length=150, Percent_Identity=34, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI38683816, Length=139, Percent_Identity=35.2517985611511, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI55741641, Length=135, Percent_Identity=34.8148148148148, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI223634006, Length=103, Percent_Identity=37.8640776699029, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI116875852, Length=129, Percent_Identity=32.5581395348837, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI225543461, Length=107, Percent_Identity=39.2523364485981, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI156142199, Length=133, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI55742857, Length=126, Percent_Identity=38.8888888888889, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI46519147, Length=100, Percent_Identity=40, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI37620163, Length=100, Percent_Identity=40, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI212646035, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI212646031, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI212646033, Length=164, Percent_Identity=32.9268292682927, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71981411, Length=176, Percent_Identity=34.0909090909091, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71981414, Length=176, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71981389, Length=176, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25145251, Length=176, Percent_Identity=34.0909090909091, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17542700, Length=176, Percent_Identity=34.0909090909091, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI212645194, Length=163, Percent_Identity=34.3558282208589, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161082089, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI161082085, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI161082099, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI161082092, Length=142, Percent_Identity=38.7323943661972, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI161082081, Length=142, Percent_Identity=38.7323943661972, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI161082106, Length=142, Percent_Identity=38.7323943661972, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI161082096, Length=142, Percent_Identity=38.7323943661972, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI161082110, Length=142, Percent_Identity=38.7323943661972, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281359521, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281359519, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558752, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558750, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558756, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28558754, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221330480, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221330474, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221330482, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573593, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330478, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550479, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45551135, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330476, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281363919, Length=187, Percent_Identity=31.5508021390374, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581260, Length=232, Percent_Identity=28.0172413793103, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581258, Length=232, Percent_Identity=28.0172413793103, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571867, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571865, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24650843, Length=141, Percent_Identity=35.4609929078014, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281362364, Length=126, Percent_Identity=34.9206349206349, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552223, Length=108, Percent_Identity=35.1851851851852, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19921030, Length=147, Percent_Identity=35.3741496598639, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI221472807, Length=108, Percent_Identity=35.1851851851852, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45550629, Length=134, Percent_Identity=34.3283582089552, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17998549, Length=108, Percent_Identity=35.1851851851852, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 24523; Mature: 24392

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTKPTNHLPKRALVAAALVASGLFAAAGAHAESLDAIVKAVKFDDIADIGKQLKSGKLDP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NTIAPNGDPLIVIAAREKSDKVAAALATTPNVDLEKEDKAGETALMLASLNGDVGLAKLL
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
IDKGAEVSKKGWAPLHYAATNGQDAVVKLLLDHDAYIDTASPNGTTPLMMAARGNHPSTV
HHCCCCCCCCCCCCEEEEECCCCHHEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCEE
TLLLDQGADPQVKNQLGITALEFAKHYNAPDAIEILSKRTTRIGASTPADAQKSAK
EEEEECCCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC
>Mature Secondary Structure 
TKPTNHLPKRALVAAALVASGLFAAAGAHAESLDAIVKAVKFDDIADIGKQLKSGKLDP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NTIAPNGDPLIVIAAREKSDKVAAALATTPNVDLEKEDKAGETALMLASLNGDVGLAKLL
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
IDKGAEVSKKGWAPLHYAATNGQDAVVKLLLDHDAYIDTASPNGTTPLMMAARGNHPSTV
HHCCCCCCCCCCCCEEEEECCCCHHEEEEEECCCCEEECCCCCCCCCEEEEECCCCCCEE
TLLLDQGADPQVKNQLGITALEFAKHYNAPDAIEILSKRTTRIGASTPADAQKSAK
EEEEECCCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]