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The map label for this gene is priB [H]

Identifier: 78066642

GI number: 78066642

Start: 2220070

End: 2220369

Strand: Reverse

Name: priB [H]

Synonym: Bcep18194_A5173

Alternate gene names: 78066642

Gene position: 2220369-2220070 (Counterclockwise)

Preceding gene: 78066643

Following gene: 78066641

Centisome position: 60.11

GC content: 58.67

Gene sequence:

>300_bases
GTGAACAGGTTGCAATTGACGGCAAGCGTCGTCGAACGCGCGCCGGTGCGATATACGCCGGCTGGTGTTCCGATCGCAAG
CGCCACATTGCATCACCGCACGGAAGTCGTCGAAGCAGGCATTCCCCGTCAGGTCGAAATGACGATCGAGGCGGTGGCGG
CCGGTGAGGCGAGCGGCAAGCTGGAAAGTCGTGAAATGGGCGTCGAAACGCTGTTCACGGGCTTCCTGGCAAAGAAAAGC
CGCAACGCGAGAACCTTGGTGTTTCACATCACAGCATTGCAGGACATTGGAAAGGACTGA

Upstream 100 bases:

>100_bases
GTTCAGCGCGAAGAAGCCAAGAAGGCGGCTGCAGCTCAGCCGACCGAAGCGCAGGCTTAAGTTCGTCATTCATTAAGCCA
TCAAGGAGCGCGTCACTCAC

Downstream 100 bases:

>100_bases
AATCATGCCCCGCCCGACTGGTAAGAAATTCGACAAGCGTCGTCAGCAACAAAACCCGCTCTTCAAGCGCAAGAAGTTCT
GCCGTTTCACGGCTGCAGGC

Product: primosomal replication protein N-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNRLQLTASVVERAPVRYTPAGVPIASATLHHRTEVVEAGIPRQVEMTIEAVAAGEASGKLESREMGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD

Sequences:

>Translated_99_residues
MNRLQLTASVVERAPVRYTPAGVPIASATLHHRTEVVEAGIPRQVEMTIEAVAAGEASGKLESREMGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD
>Mature_99_residues
MNRLQLTASVVERAPVRYTPAGVPIASATLHHRTEVVEAGIPRQVEMTIEAVAAGEASGKLESREMGVETLFTGFLAKKS
RNARTLVFHITALQDIGKD

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10714; Mature: 10714

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLQLTASVVERAPVRYTPAGVPIASATLHHRTEVVEAGIPRQVEMTIEAVAAGEASGK
CCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCC
LESREMGVETLFTGFLAKKSRNARTLVFHITALQDIGKD
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCC
>Mature Secondary Structure
MNRLQLTASVVERAPVRYTPAGVPIASATLHHRTEVVEAGIPRQVEMTIEAVAAGEASGK
CCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCC
LESREMGVETLFTGFLAKKSRNARTLVFHITALQDIGKD
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]