| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is phbB [H]
Identifier: 78066559
GI number: 78066559
Start: 2128019
End: 2128759
Strand: Reverse
Name: phbB [H]
Synonym: Bcep18194_A5090
Alternate gene names: 78066559
Gene position: 2128759-2128019 (Counterclockwise)
Preceding gene: 78066560
Following gene: 78066558
Centisome position: 57.63
GC content: 63.16
Gene sequence:
>741_bases ATGTCTCAGCGAATTGCGTACGTAACGGGCGGGATGGGCGGCATCGGCACCAGCATCTGCCAGCGCCTGTTGAAAGACGG CTTCAAGGTGGTCGCAGGTTGCGGCCCGAACTCGCCGCGCCGGGTGAAATGGCTCGAGGACCAGAAGGCGCTCGGGTACG ATTTCATCGCGTCGGAAGGCAACGTCGGCGACTGGGACTCGACCAAGGAAGCGTTCGACAAGGTCAAGGCTGAAGTCGGC GAGATCGACGTGCTGGTCAACAATGCGGGCATCACGCGCGACGTCGTGTTCCGCAAGATGACGCACGAAGACTGGACCGC CGTGATCGACACCAACCTGACGAGCCTGTTCAACGTGACGAAGCAGGTGATCGACGGCATGGTCGAACGCGGCTGGGGCC GGATCGTCAACATCTCGTCGGTGAACGGCCAGAAGGGGCAGTTCGGCCAGACCAACTACTCGACCGCGAAGGCCGGTATC CACGGCTTCACGATGTCGCTCGCACAGGAAGTCGCGACGAAGGGCGTGACGGTCAACACCGTGTCGCCGGGCTACATCGG TACCGACATGGTGAAGGCGATTCGCCCGGACGTGCTCGAGAAGATCGTCGCGACGATCCCGGTGCGTCGTCTTGGCGGGC CGGAGGAAATCGGTTCGATCGTCGCGTGGCTCGCGTCGAACGATTCCGGTTTCGCGACGGGCGCCGACTTCTCGCTGAAC GGCGGCCTGCACATGGGCTGA
Upstream 100 bases:
>100_bases ACCGAATCCGTGTGCCGGCCGATTGCGGCTTCGGCCGGCGTCACGTGAAGTCAGAGGGGGCCTCCGGCAGCTCTCGAAAC CAAAAAATGGAGTGAGATTT
Downstream 100 bases:
>100_bases GCGTCCGCGCTGCGCGGGCCGGGTGGCCGCGCAGCCGGGCGTTTTCCGAAGGCCCCCGCCTCCCGGATTCGGGCGGCGGG GATTCGTCACTTCCGCTACG
Product: acetyacetyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSQRIAYVTGGMGGIGTSICQRLLKDGFKVVAGCGPNSPRRVKWLEDQKALGYDFIASEGNVGDWDSTKEAFDKVKAEVG EIDVLVNNAGITRDVVFRKMTHEDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIVNISSVNGQKGQFGQTNYSTAKAGI HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGGPEEIGSIVAWLASNDSGFATGADFSLN GGLHMG
Sequences:
>Translated_246_residues MSQRIAYVTGGMGGIGTSICQRLLKDGFKVVAGCGPNSPRRVKWLEDQKALGYDFIASEGNVGDWDSTKEAFDKVKAEVG EIDVLVNNAGITRDVVFRKMTHEDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIVNISSVNGQKGQFGQTNYSTAKAGI HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGGPEEIGSIVAWLASNDSGFATGADFSLN GGLHMG >Mature_245_residues SQRIAYVTGGMGGIGTSICQRLLKDGFKVVAGCGPNSPRRVKWLEDQKALGYDFIASEGNVGDWDSTKEAFDKVKAEVGE IDVLVNNAGITRDVVFRKMTHEDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIVNISSVNGQKGQFGQTNYSTAKAGIH GFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGGPEEIGSIVAWLASNDSGFATGADFSLNG GLHMG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=35.9683794466403, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=32.520325203252, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=31.8897637795276, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI4504505, Length=250, Percent_Identity=31.6, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=29.9595141700405, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=30.4, Blast_Score=94, Evalue=8e-20, Organism=Homo sapiens, GI83715985, Length=254, Percent_Identity=30.3149606299213, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=28.1124497991968, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=27.9352226720648, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.6, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI109715829, Length=239, Percent_Identity=25.9414225941423, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=27.6422764227642, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI66933014, Length=187, Percent_Identity=28.8770053475936, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI31542939, Length=206, Percent_Identity=31.0679611650485, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI59889578, Length=208, Percent_Identity=29.3269230769231, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705855, Length=209, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI40548397, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI214010158, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI214010156, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI22758144, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI22507405, Length=187, Percent_Identity=30.4812834224599, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI7657478, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI226371731, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI19743808, Length=193, Percent_Identity=29.0155440414508, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI210032112, Length=143, Percent_Identity=28.6713286713287, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=27, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=42.3387096774194, Blast_Score=200, Evalue=7e-53, Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=36.2549800796813, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=31.25, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=29.7520661157025, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=27.9527559055118, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=32, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=27.7551020408163, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=34.0540540540541, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=29.7520661157025, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=27.2, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=27.0833333333333, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=25.3968253968254, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=24.6153846153846, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786701, Length=222, Percent_Identity=26.1261261261261, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=40.9836065573771, Blast_Score=165, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=37.8048780487805, Blast_Score=160, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=30.4, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17568967, Length=217, Percent_Identity=34.5622119815668, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17538182, Length=254, Percent_Identity=31.8897637795276, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=29.3172690763052, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=29.2887029288703, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=28.7449392712551, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=28, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203115, Length=196, Percent_Identity=31.1224489795918, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=31.1224489795918, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=28.6852589641434, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=27.6, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561272, Length=196, Percent_Identity=28.0612244897959, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=27.6515151515151, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=29.4776119402985, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=29.8039215686275, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=28.1954887218045, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538486, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=27.1375464684015, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=29.3233082706767, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562904, Length=252, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=28.515625, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=28.5185185185185, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=26.8939393939394, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32563809, Length=212, Percent_Identity=25, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17507613, Length=212, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17565030, Length=251, Percent_Identity=28.2868525896414, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI72000259, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544670, Length=247, Percent_Identity=25.5060728744939, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17508895, Length=138, Percent_Identity=30.4347826086957, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17531453, Length=278, Percent_Identity=26.6187050359712, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17563726, Length=184, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17564282, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=254, Percent_Identity=31.8897637795276, Blast_Score=108, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=26.2745098039216, Blast_Score=75, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=35.7142857142857, Blast_Score=137, Evalue=5e-33, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=33.596837944664, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.1587301587302, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=33.203125, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357041, Length=174, Percent_Identity=37.3563218390805, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=28, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=31.496062992126, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=28.3400809716599, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859837, Length=230, Percent_Identity=31.304347826087, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=34.3195266272189, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24641232, Length=216, Percent_Identity=30.0925925925926, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581726, Length=177, Percent_Identity=26.5536723163842, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24648693, Length=204, Percent_Identity=31.3725490196078, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355889, Length=204, Percent_Identity=31.3725490196078, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=29.5566502463054, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI281364494, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641388, Length=205, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24584748, Length=190, Percent_Identity=26.8421052631579, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706930, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706928, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706926, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706924, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI78706922, Length=215, Percent_Identity=29.3023255813954, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=26.8421052631579, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21355631, Length=174, Percent_Identity=29.3103448275862, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24656154, Length=264, Percent_Identity=27.6515151515151, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI19922628, Length=264, Percent_Identity=27.6515151515151, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 26302; Mature: 26171
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRIAYVTGGMGGIGTSICQRLLKDGFKVVAGCGPNSPRRVKWLEDQKALGYDFIASEG CCCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCEEECCCC NVGDWDSTKEAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTHEDWTAVIDTNLTSLFNVT CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCHHEEHHCCHHHHHHHH KQVIDGMVERGWGRIVNISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEC VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGGPEEIGSIVAWLASNDSGFATGADFSLN CCCCCCCHHHHHHHCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEC GGLHMG CCCCCC >Mature Secondary Structure SQRIAYVTGGMGGIGTSICQRLLKDGFKVVAGCGPNSPRRVKWLEDQKALGYDFIASEG CCEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCEEECCCC NVGDWDSTKEAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTHEDWTAVIDTNLTSLFNVT CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCHHEEHHCCHHHHHHHH KQVIDGMVERGWGRIVNISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEC VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGGPEEIGSIVAWLASNDSGFATGADFSLN CCCCCCCHHHHHHHCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEC GGLHMG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670935 [H]