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The map label for this gene is dap [H]

Identifier: 78065821

GI number: 78065821

Start: 1304908

End: 1306569

Strand: Reverse

Name: dap [H]

Synonym: Bcep18194_A4350

Alternate gene names: 78065821

Gene position: 1306569-1304908 (Counterclockwise)

Preceding gene: 78065822

Following gene: 78065818

Centisome position: 35.37

GC content: 66.06

Gene sequence:

>1662_bases
ATGACATTCGACTCATCCGCCACGACGACGCAGCTCGACGCGCTGTTCGCGCGTTATCACCACGCCGATGCCCCCGGATT
GATCGCCGGCATCGTCCATCACGGCCAGCTGCTGTATCGGCGCGGTTTCGGCATGGCCAGCCTCGAACACGGCATCGCCA
ACACGCCGGCCACCCGCATGCGCATCGGCTCGGTCAGCAAGCATGTCACTTGCCTCGCCGTGCTGCTCCTGTGCGAGCAC
GGCGCGCTCGACGCCGACGCCCCCATCGGCACGTATCTGCCGGAACTCCCGCCGGCCGCGGGCCGACCGACGCTGCGGCA
GCTGATGTCGCATCGCGGCGGGCAGCGATGCGCGCTGGACCTTGCGCTACTGACGCAGGGGCTCGCGATGTCACCGCCTG
GCGCGTTCCTGGCCGCGCAGCAACGTCAACGCGACGAAAATTTTCCGCCGGGCGAACGCATGATGTATTCGAACGGCGGC
TATCACCTGCTGTCGCTCGCCGTCGAAAGTGCGAGCGGGATGCCGTTCGAAGCATTGCTCGCAACCCGTATCTTCGCTCC
CCTGCGCATGCACGACACCGCGTGCGTACGCAACGACATGACGATCGAGCGCGGCATCGCGACGATGCATATTCCTGACA
CCACGGGCGAATACCGGCGCGGGATCTTTCCGACGTGGGAACTGTTGGGCGAAGGCTCGATCGTCTCGACCGTCGACGAC
ATGCTGCGATGGACCGCGCACCTGCGATGCAGCAACAAGATCGTCGGCAACGCCGACACCTGGCGCCAGATGCTGGCGTT
GCCCGTATTCTCCAGCGGTCTGCGCAGCCAGTACTCGCTCGGTCTCACGCAGGGCAGCTATCGCGGCGTCGAACTGATCC
AGCATTCCGGTGGCGTCGTCGGCGGGACTTGCCAGATGCTGGTGTCGATTCCGCACGGGCTTGACGTCGTATTGCTCAGC
AACGGCGCGCTCGACGCACCGTTAGAACTGTCGAGGCGTGTGGTCGACATCGTACTGGCGGGCGAGCTGCGTGGCGATGG
CCCGCCTGCCGCGGCGCGCGCCGCCGATCATGCGGCGCGCCTAGGCCGGTACCGGTCGCCCGGCACCGGCGCCGTGTATG
CGCTGGAAGATCACGACGGTGCGCTGGTGTTGGCTGGCCCCCTTTGCCCCAGACGCTCGATGACGCTCTACGACAGCGCG
GATGATCTGAATGACGTCGAGCTCGAAGCGAGCGGCGACGGTTTGTTGGCGCTGCGGTGGGGATCGTCTTGCACGCCGGA
CGATCTCTCCAGCCTGCGCATCGTGCATTGCGGCCATGTCGACACGTTCGAACGCGTCGGCGAAGCACCCGCGATGACAC
CCCATCTCGCCGCCGCGATGTCCGGCACATTCGCCAGCCACGACGCCGATGCCCACGCGACCATTCGGCTCGACAACGAA
GCGCTCGTGCTTCGCCTGCACGGTGCGGTGGGCCATTGCGACTACCGCCTCACGCCGCTGGCCCACGATGCTTTCGAACT
GGTGCCGATCGATCCAGTGAACATCACGACCGGGATCCTTGCGTTGACGCGCGACGCAACGCGCAACGACATCACCGGCT
TTCGCGTCGATACCGCGCGTACCCGGCATCTGGCGTTCACACGGGTGCATGCCAACGCCTGA

Upstream 100 bases:

>100_bases
TCGTGAGCCGGGCGTCGCCTACATCGACGGCCTGCTGCACTGCCCGCCCGACCTCTGGGACCACGCGGGCTTCCCTGCCT
TCTCTCGCTGAGTTATCGAC

Downstream 100 bases:

>100_bases
CGCTGGCCGGCGTCGGATGACGCCGGCACGTATTCACCTCGAAGACGCAAACGGATTCGACACGCGCGGCCAGTAGTTGA
GGTCACGATGACGATAATCC

Product: Beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MTFDSSATTTQLDALFARYHHADAPGLIAGIVHHGQLLYRRGFGMASLEHGIANTPATRMRIGSVSKHVTCLAVLLLCEH
GALDADAPIGTYLPELPPAAGRPTLRQLMSHRGGQRCALDLALLTQGLAMSPPGAFLAAQQRQRDENFPPGERMMYSNGG
YHLLSLAVESASGMPFEALLATRIFAPLRMHDTACVRNDMTIERGIATMHIPDTTGEYRRGIFPTWELLGEGSIVSTVDD
MLRWTAHLRCSNKIVGNADTWRQMLALPVFSSGLRSQYSLGLTQGSYRGVELIQHSGGVVGGTCQMLVSIPHGLDVVLLS
NGALDAPLELSRRVVDIVLAGELRGDGPPAAARAADHAARLGRYRSPGTGAVYALEDHDGALVLAGPLCPRRSMTLYDSA
DDLNDVELEASGDGLLALRWGSSCTPDDLSSLRIVHCGHVDTFERVGEAPAMTPHLAAAMSGTFASHDADAHATIRLDNE
ALVLRLHGAVGHCDYRLTPLAHDAFELVPIDPVNITTGILALTRDATRNDITGFRVDTARTRHLAFTRVHANA

Sequences:

>Translated_553_residues
MTFDSSATTTQLDALFARYHHADAPGLIAGIVHHGQLLYRRGFGMASLEHGIANTPATRMRIGSVSKHVTCLAVLLLCEH
GALDADAPIGTYLPELPPAAGRPTLRQLMSHRGGQRCALDLALLTQGLAMSPPGAFLAAQQRQRDENFPPGERMMYSNGG
YHLLSLAVESASGMPFEALLATRIFAPLRMHDTACVRNDMTIERGIATMHIPDTTGEYRRGIFPTWELLGEGSIVSTVDD
MLRWTAHLRCSNKIVGNADTWRQMLALPVFSSGLRSQYSLGLTQGSYRGVELIQHSGGVVGGTCQMLVSIPHGLDVVLLS
NGALDAPLELSRRVVDIVLAGELRGDGPPAAARAADHAARLGRYRSPGTGAVYALEDHDGALVLAGPLCPRRSMTLYDSA
DDLNDVELEASGDGLLALRWGSSCTPDDLSSLRIVHCGHVDTFERVGEAPAMTPHLAAAMSGTFASHDADAHATIRLDNE
ALVLRLHGAVGHCDYRLTPLAHDAFELVPIDPVNITTGILALTRDATRNDITGFRVDTARTRHLAFTRVHANA
>Mature_552_residues
TFDSSATTTQLDALFARYHHADAPGLIAGIVHHGQLLYRRGFGMASLEHGIANTPATRMRIGSVSKHVTCLAVLLLCEHG
ALDADAPIGTYLPELPPAAGRPTLRQLMSHRGGQRCALDLALLTQGLAMSPPGAFLAAQQRQRDENFPPGERMMYSNGGY
HLLSLAVESASGMPFEALLATRIFAPLRMHDTACVRNDMTIERGIATMHIPDTTGEYRRGIFPTWELLGEGSIVSTVDDM
LRWTAHLRCSNKIVGNADTWRQMLALPVFSSGLRSQYSLGLTQGSYRGVELIQHSGGVVGGTCQMLVSIPHGLDVVLLSN
GALDAPLELSRRVVDIVLAGELRGDGPPAAARAADHAARLGRYRSPGTGAVYALEDHDGALVLAGPLCPRRSMTLYDSAD
DLNDVELEASGDGLLALRWGSSCTPDDLSSLRIVHCGHVDTFERVGEAPAMTPHLAAAMSGTFASHDADAHATIRLDNEA
LVLRLHGAVGHCDYRLTPLAHDAFELVPIDPVNITTGILALTRDATRNDITGFRVDTARTRHLAFTRVHANA

Specific function: Hydrolyzes N-terminal residues in D-amino acid- containing peptides [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S12 family [H]

Homologues:

Organism=Escherichia coli, GI1786574, Length=253, Percent_Identity=24.901185770751, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR009090
- InterPro:   IPR012856
- InterPro:   IPR012857 [H]

Pfam domain/function: PF00144 Beta-lactamase; PF07930 DAP_B; PF07932 DAP_C [H]

EC number: =3.4.11.19 [H]

Molecular weight: Translated: 59374; Mature: 59243

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDSSATTTQLDALFARYHHADAPGLIAGIVHHGQLLYRRGFGMASLEHGIANTPATRM
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHCCCCCCCHHHE
RIGSVSKHVTCLAVLLLCEHGALDADAPIGTYLPELPPAAGRPTLRQLMSHRGGQRCALD
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEE
LALLTQGLAMSPPGAFLAAQQRQRDENFPPGERMMYSNGGYHLLSLAVESASGMPFEALL
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEHHCCCCCHHHHH
ATRIFAPLRMHDTACVRNDMTIERGIATMHIPDTTGEYRRGIFPTWELLGEGSIVSTVDD
HHHHHHHHHHCCHHHHCCCCCHHHCEEEEECCCCCCHHHCCCCCCHHHHCCCCHHHHHHH
MLRWTAHLRCSNKIVGNADTWRQMLALPVFSSGLRSQYSLGLTQGSYRGVELIQHSGGVV
HHHHHHHHEECCCEECCHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHCCCEE
GGTCQMLVSIPHGLDVVLLSNGALDAPLELSRRVVDIVLAGELRGDGPPAAARAADHAAR
CHHHHEEEECCCCCEEEEEECCCCCCCHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHH
LGRYRSPGTGAVYALEDHDGALVLAGPLCPRRSMTLYDSADDLNDVELEASGDGLLALRW
HCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEC
GSSCTPDDLSSLRIVHCGHVDTFERVGEAPAMTPHLAAAMSGTFASHDADAHATIRLDNE
CCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCC
ALVLRLHGAVGHCDYRLTPLAHDAFELVPIDPVNITTGILALTRDATRNDITGFRVDTAR
EEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCEEECCCC
TRHLAFTRVHANA
CCEEEEEEEECCC
>Mature Secondary Structure 
TFDSSATTTQLDALFARYHHADAPGLIAGIVHHGQLLYRRGFGMASLEHGIANTPATRM
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCHHHHHCCCCCCCHHHE
RIGSVSKHVTCLAVLLLCEHGALDADAPIGTYLPELPPAAGRPTLRQLMSHRGGQRCALD
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEE
LALLTQGLAMSPPGAFLAAQQRQRDENFPPGERMMYSNGGYHLLSLAVESASGMPFEALL
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEHHCCCCCHHHHH
ATRIFAPLRMHDTACVRNDMTIERGIATMHIPDTTGEYRRGIFPTWELLGEGSIVSTVDD
HHHHHHHHHHCCHHHHCCCCCHHHCEEEEECCCCCCHHHCCCCCCHHHHCCCCHHHHHHH
MLRWTAHLRCSNKIVGNADTWRQMLALPVFSSGLRSQYSLGLTQGSYRGVELIQHSGGVV
HHHHHHHHEECCCEECCHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHCCCEE
GGTCQMLVSIPHGLDVVLLSNGALDAPLELSRRVVDIVLAGELRGDGPPAAARAADHAAR
CHHHHEEEECCCCCEEEEEECCCCCCCHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHH
LGRYRSPGTGAVYALEDHDGALVLAGPLCPRRSMTLYDSADDLNDVELEASGDGLLALRW
HCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCEEEEEC
GSSCTPDDLSSLRIVHCGHVDTFERVGEAPAMTPHLAAAMSGTFASHDADAHATIRLDNE
CCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCC
ALVLRLHGAVGHCDYRLTPLAHDAFELVPIDPVNITTGILALTRDATRNDITGFRVDTAR
EEEEEEECCCCCCCEEECCCCCCCEEEEECCCCCHHHHEEEEECCCCCCCCCCEEECCCC
TRHLAFTRVHANA
CCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA