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The map label for this gene is dap [H]

Identifier: 78065817

GI number: 78065817

Start: 1297975

End: 1299618

Strand: Reverse

Name: dap [H]

Synonym: Bcep18194_A4346

Alternate gene names: 78065817

Gene position: 1299618-1297975 (Counterclockwise)

Preceding gene: 78065818

Following gene: 78065816

Centisome position: 35.18

GC content: 64.66

Gene sequence:

>1644_bases
ATGACACAAGAATCGCACGACATCGTCAACCAACTGGATACCCTGTTCGAACGCTTCAACAAATGCGATGAACCCGGCCT
CGTCGTGGCCGTGGCGCATCAAGGCGAAGTCCTCTACCGACGCGGCTTCGGCATGGCAAGCCTGGAACACGGCGTCGCCA
ATACGCCGGCCACCCGCTTGCGCATCGGCTCGACGAGCAAACACTTCACCTGCCTCGCCGCACTCCTGCTCGCCGAAGAC
GGCAAGCTCGACGTCGACGCCGGGATTCGCACGTACCTGCCCGAGCTGCCGCTGCTGGCAGGCGACCCCAGCTTGCGCCA
GCTGATGACGCACACGGGCGGCTATCGCTGCTATCTCGATGTCACGCTGCTCGCGCAAGGCGTCGCGACGCTGCCGCGTG
GCGGCGTACTCGCGGCCGAAGTCCGGCAACGCGACGTCAACTTCCCGCCGGGCGAGCGGATGATCTACTGCAACGGCGGA
TATAACCTGCTGTCGCTCGCGATCGAGCGGGTCAGCGGCATCCCCTTCGAGACCTTCCTGAAGGAACGCATCTTCGACGT
GATGGGCATGGTCGACACGGAGTCGGTCGCCGACGACATGCGCATCCGCCCGCGCATGGCGACCCAGCATGTGCCGGATG
GAAAAGGCGGATTCATGCGCGGCCTGTTTCCGTCGTGGGAAGTGCTCGGTGAAGGCGGGATCGTGTCGACGGTCGACGAC
ATGCTGCGCTGGCTCGCGCATCTGCGCGGCCCCAAGCGGGTCGGCAGCGAAGCAAGCTGGCGCCAGATGCTGACCAAACC
ACACTACTCGAGCGGCGCGGAAGGCGTCTACGCCCTCGGGCTGATGCTCACACCCCATCGCGACGTGGAGACGCTGCATC
ATGCCGGCGGTGTGTTCGGCGGCTCATGTCAGATGTTGACCGTGGCCAGGCACGCACTGGACGTCATCATTCTCACCAAC
GGCGCCGCGGCCAATCCGATTGAACTGGCTACGCAGATCGTCGATATCGTTCTGGGCGATGCCATCCTTGGCGCGAAGCC
TGCCGCGCCGCTGCAAACCGCCGGGCACGAAACCTTGCTCGGCAAGTACCACTCGCGTGTATCCGGGACGTATTGCGTGA
TCGACGATCACGACGGGCAAGTCAACGTGAGCTTGCACAACGCCAGACAGATGCCGCAGCCGCTCATCGAGACGGAGGCC
GGATTGCGGGTCGAAGAAGGGGCAGGCGGAACGCTGCTGATCAAGCCTCGAACGTCGACGGCCGCGTCACGTGTGACGGC
GATCGAGCTGGTGGACTGCGGTCACGCCGAGACGCTCGAGCGCTTGCCCGATCACGCCCCATCGCTCTCCGATGCGTCGG
CCGGTCTGACAGGCACGTATCACGGTCACGATGCCGCGGCACGTGCGACGATCGCCGTGACGAACGGTGAACTCACGCTG
ACCATGCACGGCGTCGCGGGCAGTGTCGGCTACCGGCTGGAACCCGTAGCCGACGACATTTTCACGTTCGACCCTGTCGG
TCAGATGGCCGTCATGCGTGGCGTCCTGACGGTGGAACGCTCGGGTAACGAGGTGACGCGCTTTCGCATCGACACGTCGC
GCACGCGCAACCTGACCTTCGTGCGCGAGCGGTGTGATTCGTAG

Upstream 100 bases:

>100_bases
CTGATACCGATGGGCGGCCCGGCGCTCGTCAGCGTGATTCAGCCGCGCACGATCGGCGCGGCACTTACCGTTCCGTTCTA
AATCATAGGGATAACTGAAA

Downstream 100 bases:

>100_bases
GCATCGCGTCACTTCATGGTGTGACGTTTGCGTGGTGGAGCTTGCGGCTTCGTCAAGAGACGCGAGTTCCACCATGTGCC
TGTGATGACTCGCCGTGACG

Product: Beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 546

Protein sequence:

>547_residues
MTQESHDIVNQLDTLFERFNKCDEPGLVVAVAHQGEVLYRRGFGMASLEHGVANTPATRLRIGSTSKHFTCLAALLLAED
GKLDVDAGIRTYLPELPLLAGDPSLRQLMTHTGGYRCYLDVTLLAQGVATLPRGGVLAAEVRQRDVNFPPGERMIYCNGG
YNLLSLAIERVSGIPFETFLKERIFDVMGMVDTESVADDMRIRPRMATQHVPDGKGGFMRGLFPSWEVLGEGGIVSTVDD
MLRWLAHLRGPKRVGSEASWRQMLTKPHYSSGAEGVYALGLMLTPHRDVETLHHAGGVFGGSCQMLTVARHALDVIILTN
GAAANPIELATQIVDIVLGDAILGAKPAAPLQTAGHETLLGKYHSRVSGTYCVIDDHDGQVNVSLHNARQMPQPLIETEA
GLRVEEGAGGTLLIKPRTSTAASRVTAIELVDCGHAETLERLPDHAPSLSDASAGLTGTYHGHDAAARATIAVTNGELTL
TMHGVAGSVGYRLEPVADDIFTFDPVGQMAVMRGVLTVERSGNEVTRFRIDTSRTRNLTFVRERCDS

Sequences:

>Translated_547_residues
MTQESHDIVNQLDTLFERFNKCDEPGLVVAVAHQGEVLYRRGFGMASLEHGVANTPATRLRIGSTSKHFTCLAALLLAED
GKLDVDAGIRTYLPELPLLAGDPSLRQLMTHTGGYRCYLDVTLLAQGVATLPRGGVLAAEVRQRDVNFPPGERMIYCNGG
YNLLSLAIERVSGIPFETFLKERIFDVMGMVDTESVADDMRIRPRMATQHVPDGKGGFMRGLFPSWEVLGEGGIVSTVDD
MLRWLAHLRGPKRVGSEASWRQMLTKPHYSSGAEGVYALGLMLTPHRDVETLHHAGGVFGGSCQMLTVARHALDVIILTN
GAAANPIELATQIVDIVLGDAILGAKPAAPLQTAGHETLLGKYHSRVSGTYCVIDDHDGQVNVSLHNARQMPQPLIETEA
GLRVEEGAGGTLLIKPRTSTAASRVTAIELVDCGHAETLERLPDHAPSLSDASAGLTGTYHGHDAAARATIAVTNGELTL
TMHGVAGSVGYRLEPVADDIFTFDPVGQMAVMRGVLTVERSGNEVTRFRIDTSRTRNLTFVRERCDS
>Mature_546_residues
TQESHDIVNQLDTLFERFNKCDEPGLVVAVAHQGEVLYRRGFGMASLEHGVANTPATRLRIGSTSKHFTCLAALLLAEDG
KLDVDAGIRTYLPELPLLAGDPSLRQLMTHTGGYRCYLDVTLLAQGVATLPRGGVLAAEVRQRDVNFPPGERMIYCNGGY
NLLSLAIERVSGIPFETFLKERIFDVMGMVDTESVADDMRIRPRMATQHVPDGKGGFMRGLFPSWEVLGEGGIVSTVDDM
LRWLAHLRGPKRVGSEASWRQMLTKPHYSSGAEGVYALGLMLTPHRDVETLHHAGGVFGGSCQMLTVARHALDVIILTNG
AAANPIELATQIVDIVLGDAILGAKPAAPLQTAGHETLLGKYHSRVSGTYCVIDDHDGQVNVSLHNARQMPQPLIETEAG
LRVEEGAGGTLLIKPRTSTAASRVTAIELVDCGHAETLERLPDHAPSLSDASAGLTGTYHGHDAAARATIAVTNGELTLT
MHGVAGSVGYRLEPVADDIFTFDPVGQMAVMRGVLTVERSGNEVTRFRIDTSRTRNLTFVRERCDS

Specific function: Hydrolyzes N-terminal residues in D-amino acid- containing peptides [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S12 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI115533026, Length=358, Percent_Identity=26.2569832402235, Blast_Score=89, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR009090
- InterPro:   IPR012856
- InterPro:   IPR012857 [H]

Pfam domain/function: PF00144 Beta-lactamase; PF07930 DAP_B; PF07932 DAP_C [H]

EC number: =3.4.11.19 [H]

Molecular weight: Translated: 59070; Mature: 58939

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQESHDIVNQLDTLFERFNKCDEPGLVVAVAHQGEVLYRRGFGMASLEHGVANTPATRL
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCHHHHCCCCCCCCCEE
RIGSTSKHFTCLAALLLAEDGKLDVDAGIRTYLPELPLLAGDPSLRQLMTHTGGYRCYLD
EECCCCHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCEECCCHHHHHHHHCCCCEEEEEE
VTLLAQGVATLPRGGVLAAEVRQRDVNFPPGERMIYCNGGYNLLSLAIERVSGIPFETFL
HHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHH
KERIFDVMGMVDTESVADDMRIRPRMATQHVPDGKGGFMRGLFPSWEVLGEGGIVSTVDD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH
MLRWLAHLRGPKRVGSEASWRQMLTKPHYSSGAEGVYALGLMLTPHRDVETLHHAGGVFG
HHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCC
GSCQMLTVARHALDVIILTNGAAANPIELATQIVDIVLGDAILGAKPAAPLQTAGHETLL
CCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCHHHH
GKYHSRVSGTYCVIDDHDGQVNVSLHNARQMPQPLIETEAGLRVEEGAGGTLLIKPRTST
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCEEECCCCCEEEEECCCCC
AASRVTAIELVDCGHAETLERLPDHAPSLSDASAGLTGTYHGHDAAARATIAVTNGELTL
HHHHEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCEEEE
TMHGVAGSVGYRLEPVADDIFTFDPVGQMAVMRGVLTVERSGNEVTRFRIDTSRTRNLTF
EEECCCCCCCCEEECCCCHHEECCCCHHHHHHHHHEEEECCCCEEEEEEEECCCCCCHHH
VRERCDS
HHHHCCC
>Mature Secondary Structure 
TQESHDIVNQLDTLFERFNKCDEPGLVVAVAHQGEVLYRRGFGMASLEHGVANTPATRL
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCHHHHCCCCCCCCCEE
RIGSTSKHFTCLAALLLAEDGKLDVDAGIRTYLPELPLLAGDPSLRQLMTHTGGYRCYLD
EECCCCHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCEECCCHHHHHHHHCCCCEEEEEE
VTLLAQGVATLPRGGVLAAEVRQRDVNFPPGERMIYCNGGYNLLSLAIERVSGIPFETFL
HHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHH
KERIFDVMGMVDTESVADDMRIRPRMATQHVPDGKGGFMRGLFPSWEVLGEGGIVSTVDD
HHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH
MLRWLAHLRGPKRVGSEASWRQMLTKPHYSSGAEGVYALGLMLTPHRDVETLHHAGGVFG
HHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCC
GSCQMLTVARHALDVIILTNGAAANPIELATQIVDIVLGDAILGAKPAAPLQTAGHETLL
CCHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCHHHH
GKYHSRVSGTYCVIDDHDGQVNVSLHNARQMPQPLIETEAGLRVEEGAGGTLLIKPRTST
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCEEECCCCCEEEEECCCCC
AASRVTAIELVDCGHAETLERLPDHAPSLSDASAGLTGTYHGHDAAARATIAVTNGELTL
HHHHEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCEEEE
TMHGVAGSVGYRLEPVADDIFTFDPVGQMAVMRGVLTVERSGNEVTRFRIDTSRTRNLTF
EEECCCCCCCCEEECCCCHHEECCCCHHHHHHHHHEEEECCCCEEEEEEEECCCCCCHHH
VRERCDS
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA