| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is fbpB2 [H]
Identifier: 78065788
GI number: 78065788
Start: 1262180
End: 1263868
Strand: Reverse
Name: fbpB2 [H]
Synonym: Bcep18194_A4317
Alternate gene names: 78065788
Gene position: 1263868-1262180 (Counterclockwise)
Preceding gene: 78065789
Following gene: 78065787
Centisome position: 34.21
GC content: 72.71
Gene sequence:
>1689_bases TTGACAACTGACGCATCCACCGCCGGCGCGCGCCGGCCGCCGTGCCGGCCGCGCCTGCTGCCGCGCGCGGGCAGCCTGTG GCTGCTCGCGGCGCTGGCGATCGCCGCGGCGGTCGCGGCGCCGCTTGCGGTGCTCGTGGCCGCCGCGTTCGACGCCGATC TCGCGCACTGGCGGCATCTCGCCGAATTCGTGCTGCCGCAGGCGCTCGTCAATACGATGCTGCTGCTCGCGGGCGTCGGC GCGATCGTGTCGATCGTCGGCACGGGCTGCGCCTGGCTCGTCACCGCATACGACTTTCCAGGCCGCCGGATGCTGACGTG GGCGCTGCTGCTGCCGCTCGCGGTTCCCACCTACATCGTCGCATTCGCGTATCTCGACCTGCTGCACCCGATCGGCCCCG TGCAGGGCGCGGTCCGCTGGATGCTCGGCTTCGACAGCCCGCGCCAGTTCCGCCTGCCCGACCTGCGCTCGCTGCCCGGT GCGATCTTCGTGCTCGGCTTCGTGCTGTATCCGTATGTTTACCTGAGCACGCGCGCGATGTTCGTCACGCAGTCCGCGAG CCTGCTCGAAGCCGCGCGCACGCTCGGCGCGGGACGCATCGCCACGTTCTGGCGCGTCGTCGTGCCGCTCGCGCGGCCCG CGATCGCGGTCGGCGTGAGCCTCGCGCTGCTCGAAACGCTGAACGACATCGGCGCGTCGGAATTCCTCGGCGTGCAGACG CTGACCGTGTCCGTCTACACGACATGGATCACGCGCTCCGAACTCGCCGGCGCCGCGCAGATCGCGCTCGCGATGCTCGC GATCGTCGTCGGCATGATCGTCCTCGAACGCTACGGCCGCCGCCGCCAACGCTACGCGCATGGCCGACGCATGCGGCCGA TCGCGCCGCGCCGCCTGACGGGCACGGCCGCATTCGGCGCCGCCGTGCTCGGCTGGCTGCCCGTGCTGCTCGGCTTCGGC GCGCCGGCCGCGTACCTCGCGGTCGAGACGGCCAAGCGGCTGCATCTGGTCGGCGGCGTATCCGAACAACTGATGACGGG GCTCGCGAACACGCTGACGATCGCCACCGCCGCCACCGTCGCGACGCTCGCGTGCGGGCTCGTCGTCGCATGGGCCGCAC GCGCGCAACGCGACAGCGCCCGCGCGGGTCCGGCCCGCGTGGGCGCGAGAATCGCGAGCCTCGGCTATGCGGTGCCGGGC ACCGTGCTCGCGATCGGCCTGCTGATCCCGTTCGCGGCGGCCGACCGGCTGTTCAGCGCGGTGCTCGGCCGCGACGGGCT GCTGCTGATGGGGTCGACCGCCGCGCTCGTGATCGCCTATACCGTGCGCTTTCTCGCGATCCCGGCCGGCAGCATCGAAG CCGGCCTCGCGCGCATCCCGCCGTCGCTCGAACAGGCGTCGCGCTCGCTCGGCGAGACGGCCGGCGGCACGCTGCGCCGC GTGCACCTGCCGCTGCTGCGGCCCGCGCTCACGACCAGCGCGCTGCTGGTGTTCGTCGACGCGATGAAGGAACTGCCGGC GACGCTGCTGCTGCGTCCGCTGAACTTCGACACGCTCGCGACCTGGCTGTATGCGGAAGCCGCGCGCGGCACCTACGAGG AAGGCGCGGTCGCCGCGCTCGCGATCGTGCTGGCCGGGCTGGTGCCCGTGATCCTGCTCGCCCGCACCCGCCACAAGATC GGAGCCTGA
Upstream 100 bases:
>100_bases GTGATCGCCAGCTTCGGCACGCTGAAGATCGACCCGCTGCCGCTGGCGGACATCGCGAAGCATCGCAAGCAGGCGAGCCA GCTGGTCGACAAGGTCGGCT
Downstream 100 bases:
>100_bases CACCGTGAACCTGCTCGAACTCGATGACCTCTGCCTCGCGTACGACACGCCGCACGGCCGCCGCACGGTGGTCGACGGGC TGAGCCTTGCACTGCCGCGC
Product: ABC spermidine/putrescine transporter, inner membrane subunit
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTTDASTAGARRPPCRPRLLPRAGSLWLLAALAIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTMLLLAGVG AIVSIVGTGCAWLVTAYDFPGRRMLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAVRWMLGFDSPRQFRLPDLRSLPG AIFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRIATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT LTVSVYTTWITRSELAGAAQIALAMLAIVVGMIVLERYGRRRQRYAHGRRMRPIAPRRLTGTAAFGAAVLGWLPVLLGFG APAAYLAVETAKRLHLVGGVSEQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSARAGPARVGARIASLGYAVPG TVLAIGLLIPFAAADRLFSAVLGRDGLLLMGSTAALVIAYTVRFLAIPAGSIEAGLARIPPSLEQASRSLGETAGGTLRR VHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKI GA
Sequences:
>Translated_562_residues MTTDASTAGARRPPCRPRLLPRAGSLWLLAALAIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTMLLLAGVG AIVSIVGTGCAWLVTAYDFPGRRMLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAVRWMLGFDSPRQFRLPDLRSLPG AIFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRIATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT LTVSVYTTWITRSELAGAAQIALAMLAIVVGMIVLERYGRRRQRYAHGRRMRPIAPRRLTGTAAFGAAVLGWLPVLLGFG APAAYLAVETAKRLHLVGGVSEQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSARAGPARVGARIASLGYAVPG TVLAIGLLIPFAAADRLFSAVLGRDGLLLMGSTAALVIAYTVRFLAIPAGSIEAGLARIPPSLEQASRSLGETAGGTLRR VHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKI GA >Mature_561_residues TTDASTAGARRPPCRPRLLPRAGSLWLLAALAIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTMLLLAGVGA IVSIVGTGCAWLVTAYDFPGRRMLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAVRWMLGFDSPRQFRLPDLRSLPGA IFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRIATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQTL TVSVYTTWITRSELAGAAQIALAMLAIVVGMIVLERYGRRRQRYAHGRRMRPIAPRRLTGTAAFGAAVLGWLPVLLGFGA PAAYLAVETAKRLHLVGGVSEQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSARAGPARVGARIASLGYAVPGT VLAIGLLIPFAAADRLFSAVLGRDGLLLMGSTAALVIAYTVRFLAIPAGSIEAGLARIPPSLEQASRSLGETAGGTLRRV HLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKIG A
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=174, Percent_Identity=31.0344827586207, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59220; Mature: 59089
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: PS50928 ABC_TM1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDASTAGARRPPCRPRLLPRAGSLWLLAALAIAAAVAAPLAVLVAAAFDADLAHWRHL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFVLPQALVNTMLLLAGVGAIVSIVGTGCAWLVTAYDFPGRRMLTWALLLPLAVPTYIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH AFAYLDLLHPIGPVQGAVRWMLGFDSPRQFRLPDLRSLPGAIFVLGFVLYPYVYLSTRAM HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH FVTQSASLLEAARTLGAGRIATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHE LTVSVYTTWITRSELAGAAQIALAMLAIVVGMIVLERYGRRRQRYAHGRRMRPIAPRRLT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTAAFGAAVLGWLPVLLGFGAPAAYLAVETAKRLHLVGGVSEQLMTGLANTLTIATAATV CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATLACGLVVAWAARAQRDSARAGPARVGARIASLGYAVPGTVLAIGLLIPFAAADRLFSA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VLGRDGLLLMGSTAALVIAYTVRFLAIPAGSIEAGLARIPPSLEQASRSLGETAGGTLRR HHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCCHHHHHHHH AIVLAGLVPVILLARTRHKIGA HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTDASTAGARRPPCRPRLLPRAGSLWLLAALAIAAAVAAPLAVLVAAAFDADLAHWRHL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFVLPQALVNTMLLLAGVGAIVSIVGTGCAWLVTAYDFPGRRMLTWALLLPLAVPTYIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH AFAYLDLLHPIGPVQGAVRWMLGFDSPRQFRLPDLRSLPGAIFVLGFVLYPYVYLSTRAM HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH FVTQSASLLEAARTLGAGRIATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHE LTVSVYTTWITRSELAGAAQIALAMLAIVVGMIVLERYGRRRQRYAHGRRMRPIAPRRLT EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTAAFGAAVLGWLPVLLGFGAPAAYLAVETAKRLHLVGGVSEQLMTGLANTLTIATAATV CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATLACGLVVAWAARAQRDSARAGPARVGARIASLGYAVPGTVLAIGLLIPFAAADRLFSA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VLGRDGLLLMGSTAALVIAYTVRFLAIPAGSIEAGLARIPPSLEQASRSLGETAGGTLRR HHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHH VHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCCHHHHHHHH AIVLAGLVPVILLARTRHKIGA HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]