Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 78065662

GI number: 78065662

Start: 1124246

End: 1125187

Strand: Reverse

Name: rsgA [H]

Synonym: Bcep18194_A4190

Alternate gene names: 78065662

Gene position: 1125187-1124246 (Counterclockwise)

Preceding gene: 78065663

Following gene: 78065661

Centisome position: 30.46

GC content: 66.77

Gene sequence:

>942_bases
ATGAGCCGGCCGACCTCCCGCAAGCCGGCCCCGCGCGCGTCGAATGCGCAACGGGTCGAAGGCCGCGTGATCGCGGCGCA
CGGTCGCCACTACATCGTCGCGCCTGACGATGGCGGCCCGATGCTGCAGTGCTTCCCGCGCGGCAAGAAGAGCGATATCG
CGGTCGGCGACCGTGTCGTGTACGAACTCGCATCGGCCGACCAGGGCGTCATCGTCGAGATCGGCGAACGGCGCAACCTG
CTGTACCGTTCCGACCAGTTCAAGTCGAAGCTGTTCGCGGCCAACCTCGACCAGTTGCTGATCGTGCTCGCGACCGAGCC
CTACTTCAGCGAGGACTTGCTCGGCCGTGCGCTGATCGCCGCCGAGGCAAACGAGCTGAAGCCGCTCGTCGTGCTGAACA
AGATCGACGTCGAAGCCGCGCTGCCGGTCGCGCGCGAGCGCCTCGCACCCTACCGCGCCCTTGGCTACGACGTGCTCGAG
CTGTCGGTGAAGGGCTCGCCCGACGACGCGCGCGCACAATTGATGCCGCACCTCACCGGACATTCGACGATCCTGCTCGG
CCAGTCCGGGATGGGCAAGTCGACGCTCGTGAACCTGCTCGTTCCCGATGCCGAAGCCGCGACGCGCGAGATTTCGGCTG
CGCTCAACAGCGGCCGTCACACGACGACGTTCACGCGCCTCTACCCATTGGAGGGCGGCGGCGCGCTGATCGATTCGCCG
GGCTTCCAGGAATTCGGCCTCTACCACCTGACGGAAGGTCGTCTCGAGCGCGCCTTTCCGGAGTTCCGGCCGCTGCTCGC
CGACTGCCGTTTCTATAATTGCCATCATCTGCACGAGCCCGGCTGCGCGATTCTCGAAGCCGTCGCCGACGGCCGAATCG
CACCGTCGCGGCATGCGTTGTATGCGCAGCTCGTGCACGAGGCGAGCCAGATCGTCCGCTGA

Upstream 100 bases:

>100_bases
AGGACAACGCGTCGACGCTGACGCCCGACCCCGTCTACACGGCTTTCTACTACTCGCATCCGCCTGCGTCGCAGCGGATC
GACCGCCTGATGCAGCACGC

Downstream 100 bases:

>100_bases
TCGCGCGGCACGCGCGCGGCGGCCAGCCGGTGCCATCCGGGCCGGCTTTCACCGACAGGAGCCGCGATGCGTTTCAAGGC
ACCCGATCTTGCGACGGCGC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSRPTSRKPAPRASNAQRVEGRVIAAHGRHYIVAPDDGGPMLQCFPRGKKSDIAVGDRVVYELASADQGVIVEIGERRNL
LYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPLVVLNKIDVEAALPVARERLAPYRALGYDVLE
LSVKGSPDDARAQLMPHLTGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLEGGGALIDSP
GFQEFGLYHLTEGRLERAFPEFRPLLADCRFYNCHHLHEPGCAILEAVADGRIAPSRHALYAQLVHEASQIVR

Sequences:

>Translated_313_residues
MSRPTSRKPAPRASNAQRVEGRVIAAHGRHYIVAPDDGGPMLQCFPRGKKSDIAVGDRVVYELASADQGVIVEIGERRNL
LYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPLVVLNKIDVEAALPVARERLAPYRALGYDVLE
LSVKGSPDDARAQLMPHLTGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLEGGGALIDSP
GFQEFGLYHLTEGRLERAFPEFRPLLADCRFYNCHHLHEPGCAILEAVADGRIAPSRHALYAQLVHEASQIVR
>Mature_312_residues
SRPTSRKPAPRASNAQRVEGRVIAAHGRHYIVAPDDGGPMLQCFPRGKKSDIAVGDRVVYELASADQGVIVEIGERRNLL
YRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPLVVLNKIDVEAALPVARERLAPYRALGYDVLEL
SVKGSPDDARAQLMPHLTGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLEGGGALIDSPG
FQEFGLYHLTEGRLERAFPEFRPLLADCRFYNCHHLHEPGCAILEAVADGRIAPSRHALYAQLVHEASQIVR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=302, Percent_Identity=39.7350993377483, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34218; Mature: 34086

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPTSRKPAPRASNAQRVEGRVIAAHGRHYIVAPDDGGPMLQCFPRGKKSDIAVGDRVV
CCCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHH
YELASADQGVIVEIGERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIA
HHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHEE
AEANELKPLVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKGSPDDARAQLMPHLTG
CCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCCHHHHHHCCCCCC
HSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLEGGGALIDSP
CCEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCC
GFQEFGLYHLTEGRLERAFPEFRPLLADCRFYNCHHLHEPGCAILEAVADGRIAPSRHAL
CCHHCCEEEECCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
YAQLVHEASQIVR
HHHHHHHHHHHCC
>Mature Secondary Structure 
SRPTSRKPAPRASNAQRVEGRVIAAHGRHYIVAPDDGGPMLQCFPRGKKSDIAVGDRVV
CCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHH
YELASADQGVIVEIGERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIA
HHHHCCCCCEEEEECCCCCEEEECHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHEE
AEANELKPLVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKGSPDDARAQLMPHLTG
CCCCCCCEEEEEEECCHHHHHHHHHHHCCCHHHCCCEEEEEEECCCCCHHHHHHCCCCCC
HSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLEGGGALIDSP
CCEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCC
GFQEFGLYHLTEGRLERAFPEFRPLLADCRFYNCHHLHEPGCAILEAVADGRIAPSRHAL
CCHHCCEEEECCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
YAQLVHEASQIVR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA