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The map label for this gene is nudL [H]

Identifier: 78065659

GI number: 78065659

Start: 1122052

End: 1122738

Strand: Direct

Name: nudL [H]

Synonym: Bcep18194_A4187

Alternate gene names: 78065659

Gene position: 1122052-1122738 (Clockwise)

Preceding gene: 78065658

Following gene: 78065660

Centisome position: 30.37

GC content: 65.65

Gene sequence:

>687_bases
TTGAATCGCCGCCCCATCATCGATCCCGAAGTCCTGCCGGTCGAAGGCACCGGCGCCGGCCTGCCGGCCATCGATTCCCG
ACTGATGACGCCGTCCGGCCTGCGCGACCGATTCGCGCGCACGCTCGAATGGAGCGTCGAGCCTGGCGAAGCGCGGCTGC
AGAAGGGCGTCGATCTGCGTAGCGCGGCCGTTCTCGTGCCACTGGTCGTCCGCGAGTCCGGCCTCACCGTGCTGCTGACC
CAGCGCGCCGACCACCTGAACGATCACGCCGGACAGATTAGCTTCCCCGGCGGTCGTCGCGAACCGTTCGATCGCGATGC
AACCGCAACCGCGTTGCGCGAGGCGAAGGAAGAGATCGGGCTGGCCGACAAGCGTGTCGAGATCCTCGGCGCGCTGCCCG
ACTACCTGACCGGTACGGGCTTCTGCGTGACGCCGGTAGTTGGCCTCGTGCATCCACCGTTCACCGTGCAGGCCGACACG
TTCGAAGTGGCCGAGATTTTCGAGGTGCCGCTCGCGTTCCTGATGAATCCCGCGAACCATCAGGTCCGTGTGTTTCGCTG
GGAAGGCGGCGAGCGTCGTTTTTTTGCGATGCCCTATCCGAATGGCGAACCCGGCGGGCATTACTTCATCTGGGGCGCAA
CTGCCGGCATGTTGCGCAATCTGTACCGCTTCTTGGCCGCCGGCTAG

Upstream 100 bases:

>100_bases
TTCCCAAGAGTAAGAGCTGTAAGGAAAAAGCACCCAACCGGGTGCTTTTTTCATTCTGGCGCGAGAATATGCTCGATACG
ACACGAACCCGAGAGCCCCA

Downstream 100 bases:

>100_bases
GCGCACACGGCGTCTGGGGCGCGCGGCCGGCCGCCGGGCGACCGCACCGGCAGCCATCCGGTGCTTACGCTGTGCTATCG
TTATGCAAAAAATGACATAA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNRRPIIDPEVLPVEGTGAGLPAIDSRLMTPSGLRDRFARTLEWSVEPGEARLQKGVDLRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLADKRVEILGALPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFLMNPANHQVRVFRWEGGERRFFAMPYPNGEPGGHYFIWGATAGMLRNLYRFLAAG

Sequences:

>Translated_228_residues
MNRRPIIDPEVLPVEGTGAGLPAIDSRLMTPSGLRDRFARTLEWSVEPGEARLQKGVDLRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLADKRVEILGALPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFLMNPANHQVRVFRWEGGERRFFAMPYPNGEPGGHYFIWGATAGMLRNLYRFLAAG
>Mature_228_residues
MNRRPIIDPEVLPVEGTGAGLPAIDSRLMTPSGLRDRFARTLEWSVEPGEARLQKGVDLRSAAVLVPLVVRESGLTVLLT
QRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIGLADKRVEILGALPDYLTGTGFCVTPVVGLVHPPFTVQADT
FEVAEIFEVPLAFLMNPANHQVRVFRWEGGERRFFAMPYPNGEPGGHYFIWGATAGMLRNLYRFLAAG

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=155, Percent_Identity=40, Blast_Score=110, Evalue=8e-25,
Organism=Escherichia coli, GI1788115, Length=170, Percent_Identity=41.7647058823529, Blast_Score=97, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17536993, Length=120, Percent_Identity=39.1666666666667, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI18859683, Length=169, Percent_Identity=37.2781065088757, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 25075; Mature: 25075

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRPIIDPEVLPVEGTGAGLPAIDSRLMTPSGLRDRFARTLEWSVEPGEARLQKGVDLR
CCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHH
SAAVLVPLVVRESGLTVLLTQRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIG
HHHHHHHHEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
LADKRVEILGALPDYLTGTGFCVTPVVGLVHPPFTVQADTFEVAEIFEVPLAFLMNPANH
CCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
QVRVFRWEGGERRFFAMPYPNGEPGGHYFIWGATAGMLRNLYRFLAAG
CEEEEEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRRPIIDPEVLPVEGTGAGLPAIDSRLMTPSGLRDRFARTLEWSVEPGEARLQKGVDLR
CCCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCHH
SAAVLVPLVVRESGLTVLLTQRADHLNDHAGQISFPGGRREPFDRDATATALREAKEEIG
HHHHHHHHEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHC
LADKRVEILGALPDYLTGTGFCVTPVVGLVHPPFTVQADTFEVAEIFEVPLAFLMNPANH
CCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCC
QVRVFRWEGGERRFFAMPYPNGEPGGHYFIWGATAGMLRNLYRFLAAG
CEEEEEEECCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA