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The map label for this gene is 78065652

Identifier: 78065652

GI number: 78065652

Start: 1116573

End: 1117748

Strand: Direct

Name: 78065652

Synonym: Bcep18194_A4180

Alternate gene names: NA

Gene position: 1116573-1117748 (Clockwise)

Preceding gene: 78065651

Following gene: 78065655

Centisome position: 30.23

GC content: 66.58

Gene sequence:

>1176_bases
ATGGACGATCGATCCGACAACGAATTTCCGGTAGCGCCGCCCGTGCCCCGCAAGGGGCGCGGTGCGGTCGACAACCTGCA
GGGGCGATACGAAATCGCGCAGCGCGAAGCGGTCGACGACGGCTGGACGCACGAGTCGGACGATACCGATTTCCCCGCGC
CGCTGCGCACGCAGGTCTTCGAGGAGCGTGCGAAGAGCATCCTGACGCACAACCAGTCGCCCGACATTCCGTTCAGCGTA
TCGCTCAATCCGTATCGCGGCTGCGAGCACGGCTGCATCTATTGCTTCGCGCGGCCGACGCACAGTTATCTCGGCCTGTC
GCCGGGGCTCGATTTCGAAAGCCGCATCTATGCGAAGGTCAACGCGGCCGAACTGCTCGAGCGCGAGATTTCACGCAAGC
GCTACGTGCCGGAGCCGATCGCGCTCGGCGTCAACACCGATGCCTACCAGCCGGTCGAGCGCGACCTGCGCATCACGCGC
AGCGTGATCCAGGTGATGCACGATCGCGGGTTGCCGTTCGCCGCGATCACGAAGTCGTCGCTGATCGAGCGCGATCTCGA
CCTGCTCGCGCCGATGGCCGAACGCGGGCAGGTGATGGCGGCGGTCACGATCACGACGCTCGATGCCGATCTCGCGCGCA
CGCTCGAGCCGCGCGCGGCAACACCGGCGCGCCGGTTGCGCACGATTCGTGCGCTGAGCGAGGCGGGCGTGCCGGTCGGC
GTGAGCATTGCCCCGGTGATTCCGTTCGTCACCGAGCCCGACATGGAGCGCTTGCTCGAGGCGTGCGCGGAAGCCGGCGC
GACGCATGCGAGTTACATCATCCTGAGGTTGCCGTGGGAAGTCGCGCCGCTGTTCAAGAACTGGCTTGCCGCGCATTTTC
CCGATCGCGCGGAGCGCGTGATGAACCGCGTGCGCGACATGCGCGGCGGGAAAGATTACGACTCGGATTTCTCGAAACGG
ATGAAGGGCGAAGGGATCTGGGCCGACCTGCTACGGCAGCGCTTCCGCCAGGCCGTCAAGCGGCTCGGGCTGAACGAGCG
CACGAACGGCATTCTCGATCTGTCGCAGTTTCGCGGTGCGCCGGCCGCCGCGGCGCCGGCGCCGCGCGTTGCTGTTCGTT
CAGCCGGCACGCGGTCGGCGCAACCGCGCGACGACATGCAATTGAACCTGTTCTGA

Upstream 100 bases:

>100_bases
CGCCTGCGGCAGGCTGTCGGCCCCTTTATCCCGCCCTTGGCATGCTGCGCCCAATACTGTATAAATGTACAGTATTGGGC
GCAGGCGAATGGGTGGGTAC

Downstream 100 bases:

>100_bases
CCGGCGTGCCAAACCGGCTCGGAGCGCCGGTGCGTAGCGGCCGTTACGCTTACTGCGAAATCTGCTTGGCCGCTTCGACC
TGCGACTCGAAATACGTCTG

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDDRSDNEFPVAPPVPRKGRGAVDNLQGRYEIAQREAVDDGWTHESDDTDFPAPLRTQVFEERAKSILTHNQSPDIPFSV
SLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITR
SVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDADLARTLEPRAATPARRLRTIRALSEAGVPVG
VSIAPVIPFVTEPDMERLLEACAEAGATHASYIILRLPWEVAPLFKNWLAAHFPDRAERVMNRVRDMRGGKDYDSDFSKR
MKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSQFRGAPAAAAPAPRVAVRSAGTRSAQPRDDMQLNLF

Sequences:

>Translated_391_residues
MDDRSDNEFPVAPPVPRKGRGAVDNLQGRYEIAQREAVDDGWTHESDDTDFPAPLRTQVFEERAKSILTHNQSPDIPFSV
SLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITR
SVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDADLARTLEPRAATPARRLRTIRALSEAGVPVG
VSIAPVIPFVTEPDMERLLEACAEAGATHASYIILRLPWEVAPLFKNWLAAHFPDRAERVMNRVRDMRGGKDYDSDFSKR
MKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSQFRGAPAAAAPAPRVAVRSAGTRSAQPRDDMQLNLF
>Mature_391_residues
MDDRSDNEFPVAPPVPRKGRGAVDNLQGRYEIAQREAVDDGWTHESDDTDFPAPLRTQVFEERAKSILTHNQSPDIPFSV
SLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITR
SVIQVMHDRGLPFAAITKSSLIERDLDLLAPMAERGQVMAAVTITTLDADLARTLEPRAATPARRLRTIRALSEAGVPVG
VSIAPVIPFVTEPDMERLLEACAEAGATHASYIILRLPWEVAPLFKNWLAAHFPDRAERVMNRVRDMRGGKDYDSDFSKR
MKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSQFRGAPAAAAPAPRVAVRSAGTRSAQPRDDMQLNLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43665; Mature: 43665

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRSDNEFPVAPPVPRKGRGAVDNLQGRYEIAQREAVDDGWTHESDDTDFPAPLRTQVF
CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
EERAKSILTHNQSPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKV
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHCC
NAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITRSVIQVMHDRGLPFAAITKSS
CHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIERDLDLLAPMAERGQVMAAVTITTLDADLARTLEPRAATPARRLRTIRALSEAGVPVG
HHHHHHHHHCCHHHCCCEEEEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
VSIAPVIPFVTEPDMERLLEACAEAGATHASYIILRLPWEVAPLFKNWLAAHFPDRAERV
CCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHH
MNRVRDMRGGKDYDSDFSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSQFRGA
HHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCC
PAAAAPAPRVAVRSAGTRSAQPRDDMQLNLF
CCCCCCCCCHHHHCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MDDRSDNEFPVAPPVPRKGRGAVDNLQGRYEIAQREAVDDGWTHESDDTDFPAPLRTQVF
CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
EERAKSILTHNQSPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKV
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHCC
NAAELLEREISRKRYVPEPIALGVNTDAYQPVERDLRITRSVIQVMHDRGLPFAAITKSS
CHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LIERDLDLLAPMAERGQVMAAVTITTLDADLARTLEPRAATPARRLRTIRALSEAGVPVG
HHHHHHHHHCCHHHCCCEEEEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
VSIAPVIPFVTEPDMERLLEACAEAGATHASYIILRLPWEVAPLFKNWLAAHFPDRAERV
CCHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHH
MNRVRDMRGGKDYDSDFSKRMKGEGIWADLLRQRFRQAVKRLGLNERTNGILDLSQFRGA
HHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCC
PAAAAPAPRVAVRSAGTRSAQPRDDMQLNLF
CCCCCCCCCHHHHCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]