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The map label for this gene is plpC [H]

Identifier: 78065646

GI number: 78065646

Start: 1109848

End: 1110642

Strand: Direct

Name: plpC [H]

Synonym: Bcep18194_A4174

Alternate gene names: 78065646

Gene position: 1109848-1110642 (Clockwise)

Preceding gene: 78065645

Following gene: 78065647

Centisome position: 30.04

GC content: 64.78

Gene sequence:

>795_bases
ATGCAACGACGCTTCATGCTGAAATTCGCGGCGGCACTGGGCGCAGCCGCGCTGTTCTCGGGCGCGCACGCGCAGGCCGA
AACCATCAAGGTGGGCGTAACGGGCGGGCCGCACGCGCAGATCATGGAAGCGGTGAAGAAGGCCGCGGCGAAGAGCGGCC
TCGACATCCGCATCGTCGAATTCTCGGATTACGTGCAGCCGAACGCCGCGCTCGCGTCGGGCGACCTCGACGCGAACAGC
TACCAGCACGATCCGTATCTGCAGGCGCAGGTGAAGGATCGCGGCTACAAACTGATCAAGGTCGCGGATACCGTCACGTT
CCCGATGGGCATCTATTCGAAGCGCGTGAAGTCGCTGGCCGAACTGAAGCCGGGCGCGCGCATCGCGGTTCCGAACGATC
CGACCAACGGCGGCCGTGCGCTGCTGTTGCTGCAAAAGCAGGGCCTGCTGAAGCTGCGCGCGGACGCGGGGCTGAAGGCG
ACGCCGCTCGATATCGTCGACAATCCGCGCAAGCTGAAGATCGTCGAACTGGATGCGGCGCAGATTCCGCGCTCGCTCGG
CGACGTCGACGCGGCCGCGATCAACACCAACTACGCGATGGAAGCGGGGTTGAAACCGAAACAGGACGCGATCGCGATCG
AGGGTCCGAATGGCCCGTACGCGAACATCCTCGCGATCCGCGAGGCGGACCGGAGCAAGCCGTGGGTCGCGAAACTGGTC
GCGGCCTATCATTCGGCCGAGGTGAAGCAGTTCATCGAAGGCAAGTTCGGCGGCGCGGTCATTGCCGCCTGGTAA

Upstream 100 bases:

>100_bases
TCCTGATCGTATTCGTGCAGATCGTGCAGTCGTTCGGCGACTGGCTCGTCCGCCGGCTGAGCCACAAGTAAAACAAGATT
GATCCGTTAGGGGACACACG

Downstream 100 bases:

>100_bases
CAGGCGAAGCACGGCGTGCCCGGCAAGATTAGAGTCGATGATCGAAAACCCGGGCTTTGCGTCCGGGTTTTTTCTCTTTT
AAAATAGAACGACCGTTCGC

Product: ABC metal ion transporter, periplasmic ligand binding protein

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQRRFMLKFAAALGAAALFSGAHAQAETIKVGVTGGPHAQIMEAVKKAAAKSGLDIRIVEFSDYVQPNAALASGDLDANS
YQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARIAVPNDPTNGGRALLLLQKQGLLKLRADAGLKA
TPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAIREADRSKPWVAKLV
AAYHSAEVKQFIEGKFGGAVIAAW

Sequences:

>Translated_264_residues
MQRRFMLKFAAALGAAALFSGAHAQAETIKVGVTGGPHAQIMEAVKKAAAKSGLDIRIVEFSDYVQPNAALASGDLDANS
YQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARIAVPNDPTNGGRALLLLQKQGLLKLRADAGLKA
TPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAIREADRSKPWVAKLV
AAYHSAEVKQFIEGKFGGAVIAAW
>Mature_264_residues
MQRRFMLKFAAALGAAALFSGAHAQAETIKVGVTGGPHAQIMEAVKKAAAKSGLDIRIVEFSDYVQPNAALASGDLDANS
YQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLAELKPGARIAVPNDPTNGGRALLLLQKQGLLKLRADAGLKA
TPLDIVDNPRKLKIVELDAAQIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAIREADRSKPWVAKLV
AAYHSAEVKQFIEGKFGGAVIAAW

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=259, Percent_Identity=48.6486486486487, Blast_Score=244, Evalue=5e-66,
Organism=Escherichia coli, GI1790093, Length=244, Percent_Identity=46.7213114754098, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28166; Mature: 28166

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRFMLKFAAALGAAALFSGAHAQAETIKVGVTGGPHAQIMEAVKKAAAKSGLDIRIVE
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE
FSDYVQPNAALASGDLDANSYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLA
ECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHHHH
ELKPGARIAVPNDPTNGGRALLLLQKQGLLKLRADAGLKATPLDIVDNPRKLKIVELDAA
HCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCEEEEEEECHH
QIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAIREADRSKPWVAKLV
HCCHHHCCCCCEEECCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHH
AAYHSAEVKQFIEGKFGGAVIAAW
HHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MQRRFMLKFAAALGAAALFSGAHAQAETIKVGVTGGPHAQIMEAVKKAAAKSGLDIRIVE
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE
FSDYVQPNAALASGDLDANSYQHDPYLQAQVKDRGYKLIKVADTVTFPMGIYSKRVKSLA
ECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHHHH
ELKPGARIAVPNDPTNGGRALLLLQKQGLLKLRADAGLKATPLDIVDNPRKLKIVELDAA
HCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHCCCCCEEEEEEECHH
QIPRSLGDVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAIREADRSKPWVAKLV
HCCHHHCCCCCEEECCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHH
AAYHSAEVKQFIEGKFGGAVIAAW
HHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]