| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ubiG [H]
Identifier: 78065623
GI number: 78065623
Start: 1084764
End: 1085462
Strand: Reverse
Name: ubiG [H]
Synonym: Bcep18194_A4151
Alternate gene names: 78065623
Gene position: 1085462-1084764 (Counterclockwise)
Preceding gene: 78065624
Following gene: 78065622
Centisome position: 29.38
GC content: 66.38
Gene sequence:
>699_bases ATGACCAACGCCGATCCGCACGAACTCCAGAAATTCAGCGACCTCGCCCATCGGTGGTGGGATCCGAACGCCGAATTCAA GCCGCTGCACGACCTGAACCCGGTCCGGCTCGGCTGGATCGATGCGCATGCGCACCTTGCCGGCAAGCGCGCACTCGACA TCGGCTGCGGCGGCGGCATCCTGTCCGAATCGATGGCCGGACTCGGCGCGCAGGTGAAGGGGATCGACCTGTCGACCGAA GCGCTCGGCGTCGCCGACCTGCACAGCCTCGAGAGCGGCATCACGGTCGACTACGAGGCCATCGCCGCCGAAGCGATCGC CGCGCGCGAACCGGGCACCTACGATGTGGTCACGTGCATGGAGATGCTCGAGCACGTGCCGTCGCCGGGCGACATCGTCG CCGCGTGCGCGACGCTCGTGAAGCCGGGTGGCTGGGTGTTCTTCTCGACGCTGAACCGCAACCTGAAGGCCTACCTGTTC GCCGTGATCGGCGCGGAGTACATCGCGCAAATGCTGCCGAAGGGCACGCACGACTACGCGCGCTTCATCCGCCCGTCGGA ACTGGCCGGCTTCGTGCGGGCAACCGATCTGCACATCGTGGAGATCAAGGGCATCACGTATCACCCGATCGGCAAGCGCT TCGCGCTGTCGAACGACACCGACATCAACTACCTCGTCGCGTGCCGCCGCGGCGCGTGA
Upstream 100 bases:
>100_bases GCCCGTCCAGGCGCTCGCCGCTTCGCCGCTCGTCCGCTTCTTATATACTCGGGGCTGACGAACCGCAGCACCGCCCTCCT CCCGTAGCCCGTTTGCCGAC
Downstream 100 bases:
>100_bases CCTTCCAACCGGCATGACGACTCCCCTCTCGACCGCGCGGGCTGCACTCGACGAACCGCGCCTGCTGCACTGCGATGCCG TGCTGTTCGATCTGGACGGC
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTE ALGVADLHSLESGITVDYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKAYLF AVIGAEYIAQMLPKGTHDYARFIRPSELAGFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA
Sequences:
>Translated_232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTE ALGVADLHSLESGITVDYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKAYLF AVIGAEYIAQMLPKGTHDYARFIRPSELAGFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA >Mature_231_residues TNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTEA LGVADLHSLESGITVDYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKAYLFA VIGAEYIAQMLPKGTHDYARFIRPSELAGFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=31.5126050420168, Blast_Score=149, Evalue=3e-36, Organism=Escherichia coli, GI1788564, Length=225, Percent_Identity=58.2222222222222, Blast_Score=263, Evalue=6e-72, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=31.1965811965812, Blast_Score=123, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6324476, Length=282, Percent_Identity=28.3687943262411, Blast_Score=123, Evalue=3e-29, Organism=Drosophila melanogaster, GI281365311, Length=238, Percent_Identity=29.8319327731092, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585589, Length=199, Percent_Identity=32.6633165829146, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 25165; Mature: 25034
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCH LSESMAGLGAQVKGIDLSTEALGVADLHSLESGITVDYEAIAAEAIAAREPGTYDVVTCM HHHHHHCCCCEEECCCCCHHHHCHHHHHHHHCCCEECHHHHHHHHHHHCCCCCHHHHHHH EMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKAYLFAVIGAEYIAQMLPKGTHDYA HHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA HHCCHHHHHHHEEECCEEEEEECCEEECCCCCEEECCCCCCCEEEEEEECCC >Mature Secondary Structure TNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCH LSESMAGLGAQVKGIDLSTEALGVADLHSLESGITVDYEAIAAEAIAAREPGTYDVVTCM HHHHHHCCCCEEECCCCCHHHHCHHHHHHHHCCCEECHHHHHHHHHHHCCCCCHHHHHHH EMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKAYLFAVIGAEYIAQMLPKGTHDYA HHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELAGFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA HHCCHHHHHHHEEECCEEEEEECCEEECCCCCEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA