| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is ymgE [C]
Identifier: 78065593
GI number: 78065593
Start: 1050225
End: 1050575
Strand: Reverse
Name: ymgE [C]
Synonym: Bcep18194_A4121
Alternate gene names: 78065593
Gene position: 1050575-1050225 (Counterclockwise)
Preceding gene: 78065594
Following gene: 78065588
Centisome position: 28.44
GC content: 64.1
Gene sequence:
>351_bases GTGGGCGGCGCGGCGGGTCGCAATGCCGCCTTCATTCAGCTTGCGGCGACACAGCCGACGTCCGGTCATTCGACACAACT CAAGGAGAGGACAACCATGGCTCATGGCTTGATTATGTGGCTCATCATCGGTGCGATTGCCGGCTGGCTTGCCGGCTTGC TCGTCAAGGGCGGCGGCTTCGGGCTGATCGTCGACATCATCGTCGGGATCGTCGGCGCAGTGATCGGCGGCTGGCTCGCC GGGATGCTCGGCATCAGCGTCGGCAGCGGCTTCATCGGTTCGGTGATCGTCGCCGTCGTCGGAGCGGTGATCCTGCTGTT CGTGATCCGGCTATTCAAGCGAGCGGCCTGA
Upstream 100 bases:
>100_bases TGCGCGAGCCTCACCGTATGCAGACGAATTCCCTGGAAAATCCCGTTAAGGGTGCATAACATTACTTAACGATTCCGACC CGTCTATCGCGTTACATTGC
Downstream 100 bases:
>100_bases CGCTTCTCTCCACGCGCCTTCGGGCGCGTTTTCGCATCAGGCCGGCGCGCGGCCCGTTCGCCGCGCGCCGTCGGCCCGTT CAGCGCTTGGCGCGCTGCAA
Product: transglycosylase-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MGGAAGRNAAFIQLAATQPTSGHSTQLKERTTMAHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLA GMLGISVGSGFIGSVIVAVVGAVILLFVIRLFKRAA
Sequences:
>Translated_116_residues MGGAAGRNAAFIQLAATQPTSGHSTQLKERTTMAHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLA GMLGISVGSGFIGSVIVAVVGAVILLFVIRLFKRAA >Mature_115_residues GGAAGRNAAFIQLAATQPTSGHSTQLKERTTMAHGLIMWLIIGAIAGWLAGLLVKGGGFGLIVDIIVGIVGAVIGGWLAG MLGISVGSGFIGSVIVAVVGAVILLFVIRLFKRAA
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11652; Mature: 11521
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGAAGRNAAFIQLAATQPTSGHSTQLKERTTMAHGLIMWLIIGAIAGWLAGLLVKGGGF CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GLIVDIIVGIVGAVIGGWLAGMLGISVGSGFIGSVIVAVVGAVILLFVIRLFKRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGAAGRNAAFIQLAATQPTSGHSTQLKERTTMAHGLIMWLIIGAIAGWLAGLLVKGGGF CCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GLIVDIIVGIVGAVIGGWLAGMLGISVGSGFIGSVIVAVVGAVILLFVIRLFKRAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA