| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78065591
Identifier: 78065591
GI number: 78065591
Start: 1048398
End: 1049666
Strand: Direct
Name: 78065591
Synonym: Bcep18194_A4119
Alternate gene names: NA
Gene position: 1048398-1049666 (Clockwise)
Preceding gene: 78065590
Following gene: 78065592
Centisome position: 28.38
GC content: 68.95
Gene sequence:
>1269_bases ATGGTCGCTGTGAGATCGCTCGCGGCAGGCGTCGCGCTGTGGTTCGCGTCGCTGTCGCCGGCCGGCGCGCACGATGCGCA CGACGTGCCGAAGGCCGCCGATTCGCACGCCGCGCACATGAGCATGCAGGCCGCGCCCGCGCAGCAGAAGCAGCCGCTCG CGACGGGGGTGGCATTCGACACGCATCACCGGCTGTGGGTCGCGTGGGTCGAGGGCGCGCATGTCGTCGTCGCGCATTCC GACGACACGGGCCGCACGCTGTCCGCGCCCGTGACCGTCAACGCGATGCCGGAGCCGATCTACACGAGCGCCGAGAATCG CCCGAAGATCGCCACGAGTCCGGACGGGCGTGCGGTGTACGTGTCGTGGTCGATGCCGCTCGATGCGCCGTACACGGGCA TGGTGCGTTTCGCACGATCACTCGACGGCGGTGTGACGTGGAGCGTGCCCATGACCGTGCATCGCGACCGGCAGGCCATC ACGCACCGCTTCGACATGATGGCCGTCGATCCGGCCGGCAACATCGCGATCGCGTGGATCGACAAGCGCGATCTCGTCGC GGCGAAAGCGGCGGGGCAGGCGTATGAAGGCGCGGCCGTCTACTACGCGGTATCGCGCGACGGCGGCGCATCGTTCGAAG CCGAACGCAAGGTGACCGACCATACGTGCGAATGCTGTCGCATCGCGATGGCGATCGATCCGGCCGGACGTATCGAGACC GCATGGCGCAACGTGTTCCCGGGGCAGATTCGCGATCATGCGCTCGCCGCGTTGCCCGTCGCTGCGTCGGAATCGATCGT CCCGGTGCGCGCGACGTTCTCGAACTGGCACGTCGAGGCGTGCCCCGAGCATGGGCCGGCGCTGGCGATCACGCCGGACG GCACGCGCCATCTCGTCTGGTTCGGTGTCGTCGGCGGCCGGGCCGACGTGTTCTATTCGCGCATCGGCGCCGATGGCCAG CCGCGCGGCACGCCGTGGGCATTCGGCGCGAATCCCGCGGTGCCAGGCGAGCAGGCGTCGCATGCGGCACTCGTCGCGCG TGGCGACATCGTGTGGCTCGCCTGGAAGGCGTTCGACGGCGACACGATGCAGATCAAGCTGCGCCGGTCGGACGATCGCG GCGAGCACTGGTCGGCGCCGCGCGTGATCGCAGCGACATCGGGTGCAAGCGACAACCCGCAGTTGCTCGACGATGCGGGG CGAATCTATTTGTCGTGGCGCACGCGTAACGACGGCTATCGGCTGATCGCCGTGGAGGCGGTGAAATGA
Upstream 100 bases:
>100_bases ACCATCACTGGACCGCGTCGCTCGGTATCGACAACCTGACGGACCGCCGCTACTACGTGTTCCACCCGTATCCGGGCCGT ACTTTCTATGGAGAACTGAA
Downstream 100 bases:
>100_bases AGCGGCTGATTGCATTGCTGGGCATCGTGCTCGCGAGCGTGCCGGCGTGGGCCGGCGGCGAGTTGCAGCCGCTGCGCGCC GCCGACGTCGCGCGCCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; BNR Repeat-Containing Protein; BNR/Asp-Box Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Protein; Cytochrome C Biogenesis Protein; BNR/Asp-Box Repeat Domain Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MVAVRSLAAGVALWFASLSPAGAHDAHDVPKAADSHAAHMSMQAAPAQQKQPLATGVAFDTHHRLWVAWVEGAHVVVAHS DDTGRTLSAPVTVNAMPEPIYTSAENRPKIATSPDGRAVYVSWSMPLDAPYTGMVRFARSLDGGVTWSVPMTVHRDRQAI THRFDMMAVDPAGNIAIAWIDKRDLVAAKAAGQAYEGAAVYYAVSRDGGASFEAERKVTDHTCECCRIAMAIDPAGRIET AWRNVFPGQIRDHALAALPVAASESIVPVRATFSNWHVEACPEHGPALAITPDGTRHLVWFGVVGGRADVFYSRIGADGQ PRGTPWAFGANPAVPGEQASHAALVARGDIVWLAWKAFDGDTMQIKLRRSDDRGEHWSAPRVIAATSGASDNPQLLDDAG RIYLSWRTRNDGYRLIAVEAVK
Sequences:
>Translated_422_residues MVAVRSLAAGVALWFASLSPAGAHDAHDVPKAADSHAAHMSMQAAPAQQKQPLATGVAFDTHHRLWVAWVEGAHVVVAHS DDTGRTLSAPVTVNAMPEPIYTSAENRPKIATSPDGRAVYVSWSMPLDAPYTGMVRFARSLDGGVTWSVPMTVHRDRQAI THRFDMMAVDPAGNIAIAWIDKRDLVAAKAAGQAYEGAAVYYAVSRDGGASFEAERKVTDHTCECCRIAMAIDPAGRIET AWRNVFPGQIRDHALAALPVAASESIVPVRATFSNWHVEACPEHGPALAITPDGTRHLVWFGVVGGRADVFYSRIGADGQ PRGTPWAFGANPAVPGEQASHAALVARGDIVWLAWKAFDGDTMQIKLRRSDDRGEHWSAPRVIAATSGASDNPQLLDDAG RIYLSWRTRNDGYRLIAVEAVK >Mature_422_residues MVAVRSLAAGVALWFASLSPAGAHDAHDVPKAADSHAAHMSMQAAPAQQKQPLATGVAFDTHHRLWVAWVEGAHVVVAHS DDTGRTLSAPVTVNAMPEPIYTSAENRPKIATSPDGRAVYVSWSMPLDAPYTGMVRFARSLDGGVTWSVPMTVHRDRQAI THRFDMMAVDPAGNIAIAWIDKRDLVAAKAAGQAYEGAAVYYAVSRDGGASFEAERKVTDHTCECCRIAMAIDPAGRIET AWRNVFPGQIRDHALAALPVAASESIVPVRATFSNWHVEACPEHGPALAITPDGTRHLVWFGVVGGRADVFYSRIGADGQ PRGTPWAFGANPAVPGEQASHAALVARGDIVWLAWKAFDGDTMQIKLRRSDDRGEHWSAPRVIAATSGASDNPQLLDDAG RIYLSWRTRNDGYRLIAVEAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45384; Mature: 45384
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVRSLAAGVALWFASLSPAGAHDAHDVPKAADSHAAHMSMQAAPAQQKQPLATGVAFD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEE THHRLWVAWVEGAHVVVAHSDDTGRTLSAPVTVNAMPEPIYTSAENRPKIATSPDGRAVY CCCEEEEEEECCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEEE VSWSMPLDAPYTGMVRFARSLDGGVTWSVPMTVHRDRQAITHRFDMMAVDPAGNIAIAWI EEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHEEEEEEECCCCCEEEEEE DKRDLVAAKAAGQAYEGAAVYYAVSRDGGASFEAERKVTDHTCECCRIAMAIDPAGRIET CCCCEEEEHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHH AWRNVFPGQIRDHALAALPVAASESIVPVRATFSNWHVEACPEHGPALAITPDGTRHLVW HHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEEEECCCCCEEEEE FGVVGGRADVFYSRIGADGQPRGTPWAFGANPAVPGEQASHAALVARGDIVWLAWKAFDG EEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEEECCC DTMQIKLRRSDDRGEHWSAPRVIAATSGASDNPQLLDDAGRIYLSWRTRNDGYRLIAVEA CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEEEECCCCEEEEEEEE VK CC >Mature Secondary Structure MVAVRSLAAGVALWFASLSPAGAHDAHDVPKAADSHAAHMSMQAAPAQQKQPLATGVAFD CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCEEEE THHRLWVAWVEGAHVVVAHSDDTGRTLSAPVTVNAMPEPIYTSAENRPKIATSPDGRAVY CCCEEEEEEECCCEEEEEECCCCCCEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEEE VSWSMPLDAPYTGMVRFARSLDGGVTWSVPMTVHRDRQAITHRFDMMAVDPAGNIAIAWI EEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHEEEEEEECCCCCEEEEEE DKRDLVAAKAAGQAYEGAAVYYAVSRDGGASFEAERKVTDHTCECCRIAMAIDPAGRIET CCCCEEEEHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCHHH AWRNVFPGQIRDHALAALPVAASESIVPVRATFSNWHVEACPEHGPALAITPDGTRHLVW HHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEEEECCCCCEEEEE FGVVGGRADVFYSRIGADGQPRGTPWAFGANPAVPGEQASHAALVARGDIVWLAWKAFDG EEEECCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCEEEEEEEECCC DTMQIKLRRSDDRGEHWSAPRVIAATSGASDNPQLLDDAGRIYLSWRTRNDGYRLIAVEA CEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEEEECCCCEEEEEEEE VK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA