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The map label for this gene is alkB [H]

Identifier: 78065557

GI number: 78065557

Start: 1015115

End: 1016275

Strand: Reverse

Name: alkB [H]

Synonym: Bcep18194_A4085

Alternate gene names: 78065557

Gene position: 1016275-1015115 (Counterclockwise)

Preceding gene: 78065563

Following gene: 78065553

Centisome position: 27.51

GC content: 66.67

Gene sequence:

>1161_bases
ATGGCAATGACCGACGGATCGGCCTCGAGCTGGTCGGATGGCAAGCGTTACCTGTGGTTGCTCGGCGCGCTGACGATCAC
GCTGCCGATCCTCGCCGCCCAGCTCGCGCTGTCGACGGGCCTGCACGTGTTCTGGTGGTTCGGCCCGCTGTTCGCGTTCG
GCGTGATCCCGATCCTCGACACGCTGATCGGCGACGATCGCGACAACCCGCCCGAGGACGTTGTGCCGCTCCTCGAACGG
GAGCGCTACTACCGGCTGATCGTCTATCTCGCGACCCTCGTCGAATACGTCGCGTTCTTCGCGTGCGTGTGGATCGTCGG
CACGCATGCGCTCGCCTGGTACGACTACGTCGGCTTCGCGCTGTCGCTCGGCGCCGCGACGGGCATCTCGATCAATACCG
CGCACGAACTCGGGCACAAGACCAACCGCTTCGAGCGCTGGCTCGCGAAGATCACGCTCGCGCCGGTCGCATACGGCCAC
TTCTACGTCGAGCACAACCGCGGGCACCATGTACGCGTCGCGACGGCCGAGGATCCGGCGAGCGCGCGCTATGGCGAATC
GTTCTGGGCGTTCCTGCCGCGCACCGTGACCGGCAGCATCCGCTCGGCGTGGCGGCTGGAGAAGGCCCGCCTCGAACGGC
TCGGGCATTCGCCATGGACCTGGCGCAACGAGGTGCTGCACGCGTGGGCGATGACCGTCGTCGTGTGGGGCATGGCGATC
GCGATGGCCGGCAAGGTCGTGATTCCGTTCCTCGTGATCCAGGCCATCTACGGCGCGTCGCTGCTCGAAGTCGTGAACTA
CGTCGAGCATTACGGGCTCGGCCGCCGCAAGCTGCCGAGCGGCCGCTACGAACGCTGCACGCCGCAGCACTCTTGGAACA
GCAATCACGTCGTCACCAACCTGTTCCTGTACCAGTTGCAGCGCCACGCCGACCATCATGCGAATCCGACGCGCTCGTAC
CAGGCGCTGCGCCATTTCGACGACGCGCCGCAACTGCCGGCCGGCTACGCGACGATGATCCTGTTCGCGTACGTGCCGCC
GCTCTGGTATCGCGTGATGAATCCGCGCGTCGTCGCGCACTACGGCGGCGACATGGCGCAATCGAACATCAAGCCGTCGA
TCCGCGCCCGGGTGCTCGCGCAATATCCGGCCGCGGCGTGA

Upstream 100 bases:

>100_bases
GGGTGACGATCCGGCACAACCGCGCGCGCATCGCGGACCAACGAGAATTCGAACAACCGTACAGGCGGCCGCCTTCGGGC
CGGCCGGCAGGAGGGAGACA

Downstream 100 bases:

>100_bases
TCGCGGGAGACGGGCCGGGGGAAACCGGCGCCGACGCGCCGGCCCCCGGTTCCGTCGAAGTCCGGCGCGACGGCGCAGCC
GTCACGCCATTTCCGGCAGC

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAMTDGSASSWSDGKRYLWLLGALTITLPILAAQLALSTGLHVFWWFGPLFAFGVIPILDTLIGDDRDNPPEDVVPLLER
ERYYRLIVYLATLVEYVAFFACVWIVGTHALAWYDYVGFALSLGAATGISINTAHELGHKTNRFERWLAKITLAPVAYGH
FYVEHNRGHHVRVATAEDPASARYGESFWAFLPRTVTGSIRSAWRLEKARLERLGHSPWTWRNEVLHAWAMTVVVWGMAI
AMAGKVVIPFLVIQAIYGASLLEVVNYVEHYGLGRRKLPSGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSY
QALRHFDDAPQLPAGYATMILFAYVPPLWYRVMNPRVVAHYGGDMAQSNIKPSIRARVLAQYPAAA

Sequences:

>Translated_386_residues
MAMTDGSASSWSDGKRYLWLLGALTITLPILAAQLALSTGLHVFWWFGPLFAFGVIPILDTLIGDDRDNPPEDVVPLLER
ERYYRLIVYLATLVEYVAFFACVWIVGTHALAWYDYVGFALSLGAATGISINTAHELGHKTNRFERWLAKITLAPVAYGH
FYVEHNRGHHVRVATAEDPASARYGESFWAFLPRTVTGSIRSAWRLEKARLERLGHSPWTWRNEVLHAWAMTVVVWGMAI
AMAGKVVIPFLVIQAIYGASLLEVVNYVEHYGLGRRKLPSGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSY
QALRHFDDAPQLPAGYATMILFAYVPPLWYRVMNPRVVAHYGGDMAQSNIKPSIRARVLAQYPAAA
>Mature_385_residues
AMTDGSASSWSDGKRYLWLLGALTITLPILAAQLALSTGLHVFWWFGPLFAFGVIPILDTLIGDDRDNPPEDVVPLLERE
RYYRLIVYLATLVEYVAFFACVWIVGTHALAWYDYVGFALSLGAATGISINTAHELGHKTNRFERWLAKITLAPVAYGHF
YVEHNRGHHVRVATAEDPASARYGESFWAFLPRTVTGSIRSAWRLEKARLERLGHSPWTWRNEVLHAWAMTVVVWGMAIA
MAGKVVIPFLVIQAIYGASLLEVVNYVEHYGLGRRKLPSGRYERCTPQHSWNSNHVVTNLFLYQLQRHADHHANPTRSYQ
ALRHFDDAPQLPAGYATMILFAYVPPLWYRVMNPRVVAHYGGDMAQSNIKPSIRARVLAQYPAAA

Specific function: Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 43629; Mature: 43497

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMTDGSASSWSDGKRYLWLLGALTITLPILAAQLALSTGLHVFWWFGPLFAFGVIPILD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLIGDDRDNPPEDVVPLLERERYYRLIVYLATLVEYVAFFACVWIVGTHALAWYDYVGFA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLGAATGISINTAHELGHKTNRFERWLAKITLAPVAYGHFYVEHNRGHHVRVATAEDPA
HHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCC
SARYGESFWAFLPRTVTGSIRSAWRLEKARLERLGHSPWTWRNEVLHAWAMTVVVWGMAI
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AMAGKVVIPFLVIQAIYGASLLEVVNYVEHYGLGRRKLPSGRYERCTPQHSWNSNHVVTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLYQLQRHADHHANPTRSYQALRHFDDAPQLPAGYATMILFAYVPPLWYRVMNPRVVAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
YGGDMAQSNIKPSIRARVLAQYPAAA
CCCCHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMTDGSASSWSDGKRYLWLLGALTITLPILAAQLALSTGLHVFWWFGPLFAFGVIPILD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLIGDDRDNPPEDVVPLLERERYYRLIVYLATLVEYVAFFACVWIVGTHALAWYDYVGFA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLGAATGISINTAHELGHKTNRFERWLAKITLAPVAYGHFYVEHNRGHHVRVATAEDPA
HHHCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEEECCCCC
SARYGESFWAFLPRTVTGSIRSAWRLEKARLERLGHSPWTWRNEVLHAWAMTVVVWGMAI
CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AMAGKVVIPFLVIQAIYGASLLEVVNYVEHYGLGRRKLPSGRYERCTPQHSWNSNHVVTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LFLYQLQRHADHHANPTRSYQALRHFDDAPQLPAGYATMILFAYVPPLWYRVMNPRVVAH
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
YGGDMAQSNIKPSIRARVLAQYPAAA
CCCCHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2647718; 1315749; 9096332; 12804773 [H]