| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is bcr [H]
Identifier: 78065539
GI number: 78065539
Start: 992268
End: 993485
Strand: Direct
Name: bcr [H]
Synonym: Bcep18194_A4067
Alternate gene names: 78065539
Gene position: 992268-993485 (Clockwise)
Preceding gene: 78065534
Following gene: 78065543
Centisome position: 26.86
GC content: 69.95
Gene sequence:
>1218_bases ATGTCTCACGTCATCCGACGCCGGCCCGATGCCCGGCTGATCCTGTTGCTCGGCGCGCTCGCCGCCTGCGGGCCGATCGC TACCGACATGTACCTGCCGAGCCTGCCGTCGATCGCCGACGGCTTCTCCGTCAGCCCCGGCGCCGCGCAGCGCACGCTGA CGAGCTTCATGGCCGGCTTCTCGGTCGGCATGCTGCTGTACGGCCCGCTGTCCGACACGTGGGGCCGACGCCCCGTGCTG CTCGGCGGCATCGCGCTGTTCACGCTCGCGAGCATCGGCTGCTTCGTGTCGACTTCGATCGACATGCTGATCATCGTGCG CTTCCTGCAGGCACTTGGCGCCGGCGCGGCGTCGGTGCTGTCGCGAGCGATCGCGCGCGACGCGCACGAGCCGACCGACG CCGCGAAGGTGCTGTCGATGGTCGCGATCGTCACCGCGGTGGGGCCGTTGCTTGCGCCGCTGATCGGCGGGCAGATCCTG CGCTTCTCCGGTTGGCGCGGCGTGTTCGTCGTGCTGGCCGTGTTCGGCGCGGTGTGCGCGGCGACCGCGTACCTGCGCGT GCCCGAAACCTGGCCGAAGGAGCGGCGCAAGAGCGCGGCCGTGCTCGCGTCGTTCGCGTCGTACGGGCGCATCCTGTCCG ACCCCGTTGCCTGGGGCCACATGCTGTGCGGCGGGATGGCATTTGCGTCGATGTTCTCGTACATCACCGCCACGCCATTC GTGTACATCGAGTATTTCCACGTGTCGCCGCAACACTACGGGCTGCTGTTCGGCCTGAACGTCGTCGGCATCATGATCGG CAACTTCGCGAACACGCGGCTCGTCGGCCGCATCGGTTCGCTGCGCATCATCGCGGCCGCGTCGCTCGTGAGCTGCATCG CGTCGCTCGCGGTCGCGCTCGTCGCGCTGACGGGGTGGGGCGGGCTGTGGTCGATCGTCGTGTGCCTGTTCTTCGTGGTC GGCGTGGTCGGGATCCTGTCCGCGAACTGCACGACCGACCTCATGCATCGCTATCCGCACAACGCGGGCGCGTCGGCGGC CGTGTTCGGCGCGATGCAGCTGGCGCTCGGCGCGCTCGCGAGCGTCGCGATCGGCGCACTCGCGGACGGCACGCCGTTCG CGATGGGCGTGACGATCGGCATCTCGGGCGTGCTGTGTTTCGCCGGCCGCTACCTCGTGCTGCGCTGGCACGGGCGGCCC GTCAAGGCGGGCGCCTGA
Upstream 100 bases:
>100_bases GCGCGTACAATCATGGGCCTGGGCGCACCGTTCGCGGCGCGGCCTCCCGTCTTCACCGCCACGCGCGCCCCGATGCGCAC GGGCTCCATTCCGGATACCC
Downstream 100 bases:
>100_bases ACCGCGGCCTGACGGCAAAATGAAAAACGCCACCGCGCGCGCTGCGCCGGTGGCGTTTTTGTTTCGAACGCGGGAAGCGG CTGCCGCCGCACCGCGTCAA
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSHVIRRRPDARLILLLGALAACGPIATDMYLPSLPSIADGFSVSPGAAQRTLTSFMAGFSVGMLLYGPLSDTWGRRPVL LGGIALFTLASIGCFVSTSIDMLIIVRFLQALGAGAASVLSRAIARDAHEPTDAAKVLSMVAIVTAVGPLLAPLIGGQIL RFSGWRGVFVVLAVFGAVCAATAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANTRLVGRIGSLRIIAAASLVSCIASLAVALVALTGWGGLWSIVVCLFFVV GVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGISGVLCFAGRYLVLRWHGRP VKAGA
Sequences:
>Translated_405_residues MSHVIRRRPDARLILLLGALAACGPIATDMYLPSLPSIADGFSVSPGAAQRTLTSFMAGFSVGMLLYGPLSDTWGRRPVL LGGIALFTLASIGCFVSTSIDMLIIVRFLQALGAGAASVLSRAIARDAHEPTDAAKVLSMVAIVTAVGPLLAPLIGGQIL RFSGWRGVFVVLAVFGAVCAATAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANTRLVGRIGSLRIIAAASLVSCIASLAVALVALTGWGGLWSIVVCLFFVV GVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGISGVLCFAGRYLVLRWHGRP VKAGA >Mature_404_residues SHVIRRRPDARLILLLGALAACGPIATDMYLPSLPSIADGFSVSPGAAQRTLTSFMAGFSVGMLLYGPLSDTWGRRPVLL GGIALFTLASIGCFVSTSIDMLIIVRFLQALGAGAASVLSRAIARDAHEPTDAAKVLSMVAIVTAVGPLLAPLIGGQILR FSGWRGVFVVLAVFGAVCAATAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPFV YIEYFHVSPQHYGLLFGLNVVGIMIGNFANTRLVGRIGSLRIIAAASLVSCIASLAVALVALTGWGGLWSIVVCLFFVVG VVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGISGVLCFAGRYLVLRWHGRPV KAGA
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=397, Percent_Identity=34.2569269521411, Blast_Score=241, Evalue=5e-65, Organism=Escherichia coli, GI48994889, Length=396, Percent_Identity=28.030303030303, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI87082312, Length=365, Percent_Identity=29.041095890411, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790146, Length=202, Percent_Identity=33.1683168316832, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787065, Length=257, Percent_Identity=27.2373540856031, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790794, Length=223, Percent_Identity=26.0089686098655, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1790195, Length=163, Percent_Identity=28.2208588957055, Blast_Score=72, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6319657, Length=168, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=178, Percent_Identity=24.1573033707865, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322071, Length=165, Percent_Identity=28.4848484848485, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42222; Mature: 42090
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVIRRRPDARLILLLGALAACGPIATDMYLPSLPSIADGFSVSPGAAQRTLTSFMAGF CCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SVGMLLYGPLSDTWGRRPVLLGGIALFTLASIGCFVSTSIDMLIIVRFLQALGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SRAIARDAHEPTDAAKVLSMVAIVTAVGPLLAPLIGGQILRFSGWRGVFVVLAVFGAVCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH ATAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANTRLVGRIGSLRIIAAASLVSCIASLAVAL EEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VALTGWGGLWSIVVCLFFVVGVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGISGVLCFAGRYLVLRWHGRPVKAGA HHHHHHHCCCCCHHEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SHVIRRRPDARLILLLGALAACGPIATDMYLPSLPSIADGFSVSPGAAQRTLTSFMAGF CCCHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SVGMLLYGPLSDTWGRRPVLLGGIALFTLASIGCFVSTSIDMLIIVRFLQALGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SRAIARDAHEPTDAAKVLSMVAIVTAVGPLLAPLIGGQILRFSGWRGVFVVLAVFGAVCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH ATAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANTRLVGRIGSLRIIAAASLVSCIASLAVAL EEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VALTGWGGLWSIVVCLFFVVGVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGISGVLCFAGRYLVLRWHGRPVKAGA HHHHHHHCCCCCHHEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]