| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065531
Identifier: 78065531
GI number: 78065531
Start: 982182
End: 982700
Strand: Reverse
Name: 78065531
Synonym: Bcep18194_A4059
Alternate gene names: NA
Gene position: 982700-982182 (Counterclockwise)
Preceding gene: 78065532
Following gene: 78065530
Centisome position: 26.6
GC content: 64.35
Gene sequence:
>519_bases ATGTCCATCTCGATGTACCAGGCTTCGCTGCCCGTGCTGATCCGTGGCCTGACCAACCTGCAGCACATCCTCGGCAAGGC GCAGGCTCATGCGACCGAAAAGCAGATCGATCCGTCGGTGTTCGTCGGCGCCCGCCTGTACCCGGACATGCTGCCGCTCG TCCGCCAGGTCTACATCGCGACCGACACGGCCAAGGGCTGCGCCGCGCGCCTCGCCGATGTCGAGATCCCGAGCTACCCG GACGTCGAGCAGACCTTCGACGAACTGCACGCACGCATCCAGAAGACGATCGACTACCTGAAAAGCTTCGACGCCGCGCA GATCGACGGCAGCGAGGCGCGCCAGATCGTGCTGAAGATGCGCGTCGGCCCGATCGAGTTCAGCGGCCAGTCGTACCTGC TGAATTTCGTGCTGCCCAATTTCTTCTTCCACGTGACGACCGCGTACGACATCCTGCGCCACAGCGGCGTCGAGCTCGGC AAGCTCGACTACCTGGGCGGGCGCGACCAGCACACGTGA
Upstream 100 bases:
>100_bases CACGGGCCGTCCCGTCGCGCTAAGATGCAACGGCAGCGGATTCGGCGCCGCGACGCACGTCGCGTACCAGCCGCCCTCTT TTCCACCAGGAGTCGTCCCC
Downstream 100 bases:
>100_bases CGCGCGGCCGGGCAAAGCCCGGCCTGCTACCGTCCGCACCCGGGCGCACCACGCGCGGCGGCCATGCCAGGCCTGCCGCG AAGGCCGGCCGCGGCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSISMYQASLPVLIRGLTNLQHILGKAQAHATEKQIDPSVFVGARLYPDMLPLVRQVYIATDTAKGCAARLADVEIPSYP DVEQTFDELHARIQKTIDYLKSFDAAQIDGSEARQIVLKMRVGPIEFSGQSYLLNFVLPNFFFHVTTAYDILRHSGVELG KLDYLGGRDQHT
Sequences:
>Translated_172_residues MSISMYQASLPVLIRGLTNLQHILGKAQAHATEKQIDPSVFVGARLYPDMLPLVRQVYIATDTAKGCAARLADVEIPSYP DVEQTFDELHARIQKTIDYLKSFDAAQIDGSEARQIVLKMRVGPIEFSGQSYLLNFVLPNFFFHVTTAYDILRHSGVELG KLDYLGGRDQHT >Mature_171_residues SISMYQASLPVLIRGLTNLQHILGKAQAHATEKQIDPSVFVGARLYPDMLPLVRQVYIATDTAKGCAARLADVEIPSYPD VEQTFDELHARIQKTIDYLKSFDAAQIDGSEARQIVLKMRVGPIEFSGQSYLLNFVLPNFFFHVTTAYDILRHSGVELGK LDYLGGRDQHT
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19240; Mature: 19109
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISMYQASLPVLIRGLTNLQHILGKAQAHATEKQIDPSVFVGARLYPDMLPLVRQVYIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHCHHHHHHHHHHHHH TDTAKGCAARLADVEIPSYPDVEQTFDELHARIQKTIDYLKSFDAAQIDGSEARQIVLKM CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RVGPIEFSGQSYLLNFVLPNFFFHVTTAYDILRHSGVELGKLDYLGGRDQHT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SISMYQASLPVLIRGLTNLQHILGKAQAHATEKQIDPSVFVGARLYPDMLPLVRQVYIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHCHHHHHHHHHHHHH TDTAKGCAARLADVEIPSYPDVEQTFDELHARIQKTIDYLKSFDAAQIDGSEARQIVLKM CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH RVGPIEFSGQSYLLNFVLPNFFFHVTTAYDILRHSGVELGKLDYLGGRDQHT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA