Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

Click here to switch to the map view.

The map label for this gene is 78065520

Identifier: 78065520

GI number: 78065520

Start: 971609

End: 971959

Strand: Direct

Name: 78065520

Synonym: Bcep18194_A4048

Alternate gene names: NA

Gene position: 971609-971959 (Clockwise)

Preceding gene: 78065519

Following gene: 78065523

Centisome position: 26.3

GC content: 66.38

Gene sequence:

>351_bases
ATGGACAAGATCTTCCTGCGCTTCTATGTGCACGAGAAGCACCGGCTGCACTGGAAACCGCTATGGGAATGGCTGCTGGA
GGAGGCGAACCGGATGGGCGTCGCGGGCGGTTCCGCGTTTCGCGCGATGGCCGGGTTCGGCCAGCATCGCGTGCTGCACG
AGGACCGCTTCTTCGAACTGCAGGGGTCGCTTGCGATCGAGGTCGAATTCATCGTCACCGAGGACGAGGCGCAGCGCTTG
CTCGACCGGTTGTCGCACGAGAAGGTGCGCGTGTGCTACGCGATGATGCCGGCGCGCTTCGGCGTGATCGACACGCTCGG
CGCACCGCCGGCGCAGGGGCCGGCGGCGTAG

Upstream 100 bases:

>100_bases
CCCTACACTTGACTGGATCGTTCGCGCTGACGGCGCTCGGCATGTGGACCGCGCGCGCGTGGCTCGCGGCGGCCTGAGCG
TGCCGCCATCGGAGGGTGCG

Downstream 100 bases:

>100_bases
GGTACGGCGTCAGATCCCGAACATCGTCAGCGACACGGCGGCACGCGTGACGATCATCAGCAGCACCTGCACGATCACGA
ACAGCAGGATCGGCGACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDKIFLRFYVHEKHRLHWKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFIVTEDEAQRL
LDRLSHEKVRVCYAMMPARFGVIDTLGAPPAQGPAA

Sequences:

>Translated_116_residues
MDKIFLRFYVHEKHRLHWKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFIVTEDEAQRL
LDRLSHEKVRVCYAMMPARFGVIDTLGAPPAQGPAA
>Mature_116_residues
MDKIFLRFYVHEKHRLHWKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFIVTEDEAQRL
LDRLSHEKVRVCYAMMPARFGVIDTLGAPPAQGPAA

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13350; Mature: 13350

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIFLRFYVHEKHRLHWKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE
QGSLAIEVEFIVTEDEAQRLLDRLSHEKVRVCYAMMPARFGVIDTLGAPPAQGPAA
CCCEEEEEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDKIFLRFYVHEKHRLHWKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE
QGSLAIEVEFIVTEDEAQRLLDRLSHEKVRVCYAMMPARFGVIDTLGAPPAQGPAA
CCCEEEEEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA