| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065496
Identifier: 78065496
GI number: 78065496
Start: 950695
End: 952167
Strand: Direct
Name: 78065496
Synonym: Bcep18194_A4024
Alternate gene names: NA
Gene position: 950695-952167 (Clockwise)
Preceding gene: 78065495
Following gene: 78065497
Centisome position: 25.74
GC content: 59.33
Gene sequence:
>1473_bases ATGAGCAGCAGTTGGGTCAGCCAGGCGGCATCCGAGGTCGGTGACTATATCTGGAGCGGCGCGACTACAGTCGGCGATAC CGTCGTCGGCGTCGTCGCGGGGGAGTTCTCGCAAAAGCGCAATACGGGCTCGATCATCATCGATGCCGTCATCAGCATGT TCCCTGTCGCCGGAGAGGTCACGGCCGCGCGCGATGCGATCGCCATCGCGCTTCGCATGTGCGACGACCCGAAGGTCCGG CACGACGGGTGGGAGTGGGTGGCGCTCGTGCTTTGCCTTGTCGCGGTCGTTCCGGTGGTCGGAGGTTTGCTCAAGGGCAT CGGCAAGTTGTTGATGCGAGCGGTCAGCAAATCCGAAGATCTGGTCAAGCTATGCCAGGAAATCCTGGCCTTGATCCGCA AGGCCGGCTTTGGCAATGCCGTGGAGTGGCTCAGGAAACTGGACTTCAACAAGTATCAGGCTGCCGTGAAAAACGCGTTC GGCATGTTGCTGGATCGCATCGGCAAGGCGTTGCATTTCATTCTGAACCGCCTCGGGTCTGTTATCCCGGCGCGGGTGGA GAGTTACATCCGGAAGCTGCTGCCGATGCTGGAGGAGCTGCGCAAGCTGGGGGACACGCAAATCGCGCTGGCCTTCAAGG ATCTGATGCAGTTGCTGGAGCGTGTGCGAGGCCATATGGTGGAGGGCACCTGGGCGGATGTGAAGGTGGGGAGCGGCACC ACTCGGACGATGACCGAGGAGGCGCGCCTGGCTCACCTGGCCGAGGAGACGAAGAGCCTGGGGCACAAGCCGATGACCCT CAAGCAATACGTACATAAAGAAGGGTGGTCCGACCTTCGCACCTTTGAAGTGGGGGAGGCCATCGGTACGTTCAGCTCCA AGGTGCCGATTGAAGCGATTACTCGAGCGCCGGGCGAGGTGATGATTCGTGTGGTCGACACGCGTTACCTGGCCAGCCCA CGGACAATCCCAGGCAAATTTTGGACCGATACTCTTGCTCCAAACGGACTCTGGTGGCGTATCTATAGCGCGATCAAGCA CGCGTGGAGCATGAATGGCAGCTATGTGAAGATAAAGGTGCCGACGCGCGAGGCAATGGAAAAGCTCGGCATCGAAGTCC CAGCTGGATGGAACGGGATGCGCCTGTGGAAGGGGCGGATTGCGGAGCAATGGGACGACGAAAAGGAGGTTGCCACCATG CGCTTGCTGGTCGGGGGTGACCTTCAATTCTTCGTGGACTTTGACAACAAGTTCAATGCACCCGTGAAAAAATGGATAGA TGCACAGCTCGCGAACGGGCAGCTCAAGGCGCTTCGGACGCATTGGACTGACGTTAAGCTACCCGATCAAGCAACTGCAC GAGCGCTCATGCTGGCCGAGCGTGAGCGATCGGCCAAGATCAGGCAGGAAGGTTACGCGCGGAGAGCGATATCCGATGCA GGCAAACAATTGACGGACGAACAGGTTCCATGA
Upstream 100 bases:
>100_bases CCTACGAAATCAAGGCTACCGAGAAAAATCCCAGCTACAAGGCTGATTGGGACGAATTCGACATGCAAGCCTCCCTGGAC CGGATGCAAGGAGGTCGGGC
Downstream 100 bases:
>100_bases TGTTGAATATTTTGACCATGACCCCGGAGCAGGAACAGGATGCGCGAGCAAAGGCGTTTTATCTGCTCAAGAAGTGGACG AGTTTCACGTTCCTGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MSSSWVSQAASEVGDYIWSGATTVGDTVVGVVAGEFSQKRNTGSIIIDAVISMFPVAGEVTAARDAIAIALRMCDDPKVR HDGWEWVALVLCLVAVVPVVGGLLKGIGKLLMRAVSKSEDLVKLCQEILALIRKAGFGNAVEWLRKLDFNKYQAAVKNAF GMLLDRIGKALHFILNRLGSVIPARVESYIRKLLPMLEELRKLGDTQIALAFKDLMQLLERVRGHMVEGTWADVKVGSGT TRTMTEEARLAHLAEETKSLGHKPMTLKQYVHKEGWSDLRTFEVGEAIGTFSSKVPIEAITRAPGEVMIRVVDTRYLASP RTIPGKFWTDTLAPNGLWWRIYSAIKHAWSMNGSYVKIKVPTREAMEKLGIEVPAGWNGMRLWKGRIAEQWDDEKEVATM RLLVGGDLQFFVDFDNKFNAPVKKWIDAQLANGQLKALRTHWTDVKLPDQATARALMLAERERSAKIRQEGYARRAISDA GKQLTDEQVP
Sequences:
>Translated_490_residues MSSSWVSQAASEVGDYIWSGATTVGDTVVGVVAGEFSQKRNTGSIIIDAVISMFPVAGEVTAARDAIAIALRMCDDPKVR HDGWEWVALVLCLVAVVPVVGGLLKGIGKLLMRAVSKSEDLVKLCQEILALIRKAGFGNAVEWLRKLDFNKYQAAVKNAF GMLLDRIGKALHFILNRLGSVIPARVESYIRKLLPMLEELRKLGDTQIALAFKDLMQLLERVRGHMVEGTWADVKVGSGT TRTMTEEARLAHLAEETKSLGHKPMTLKQYVHKEGWSDLRTFEVGEAIGTFSSKVPIEAITRAPGEVMIRVVDTRYLASP RTIPGKFWTDTLAPNGLWWRIYSAIKHAWSMNGSYVKIKVPTREAMEKLGIEVPAGWNGMRLWKGRIAEQWDDEKEVATM RLLVGGDLQFFVDFDNKFNAPVKKWIDAQLANGQLKALRTHWTDVKLPDQATARALMLAERERSAKIRQEGYARRAISDA GKQLTDEQVP >Mature_489_residues SSSWVSQAASEVGDYIWSGATTVGDTVVGVVAGEFSQKRNTGSIIIDAVISMFPVAGEVTAARDAIAIALRMCDDPKVRH DGWEWVALVLCLVAVVPVVGGLLKGIGKLLMRAVSKSEDLVKLCQEILALIRKAGFGNAVEWLRKLDFNKYQAAVKNAFG MLLDRIGKALHFILNRLGSVIPARVESYIRKLLPMLEELRKLGDTQIALAFKDLMQLLERVRGHMVEGTWADVKVGSGTT RTMTEEARLAHLAEETKSLGHKPMTLKQYVHKEGWSDLRTFEVGEAIGTFSSKVPIEAITRAPGEVMIRVVDTRYLASPR TIPGKFWTDTLAPNGLWWRIYSAIKHAWSMNGSYVKIKVPTREAMEKLGIEVPAGWNGMRLWKGRIAEQWDDEKEVATMR LLVGGDLQFFVDFDNKFNAPVKKWIDAQLANGQLKALRTHWTDVKLPDQATARALMLAERERSAKIRQEGYARRAISDAG KQLTDEQVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54539; Mature: 54408
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSWVSQAASEVGDYIWSGATTVGDTVVGVVAGEFSQKRNTGSIIIDAVISMFPVAGEV CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH TAARDAIAIALRMCDDPKVRHDGWEWVALVLCLVAVVPVVGGLLKGIGKLLMRAVSKSED HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LVKLCQEILALIRKAGFGNAVEWLRKLDFNKYQAAVKNAFGMLLDRIGKALHFILNRLGS HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIPARVESYIRKLLPMLEELRKLGDTQIALAFKDLMQLLERVRGHMVEGTWADVKVGSGT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCC TRTMTEEARLAHLAEETKSLGHKPMTLKQYVHKEGWSDLRTFEVGEAIGTFSSKVPIEAI CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH TRAPGEVMIRVVDTRYLASPRTIPGKFWTDTLAPNGLWWRIYSAIKHAWSMNGSYVKIKV HCCCHHHEEEEHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC PTREAMEKLGIEVPAGWNGMRLWKGRIAEQWDDEKEVATMRLLVGGDLQFFVDFDNKFNA CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCCEEEEEECCCCCCC PVKKWIDAQLANGQLKALRTHWTDVKLPDQATARALMLAERERSAKIRQEGYARRAISDA HHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQLTDEQVP HHHCCCCCCC >Mature Secondary Structure SSSWVSQAASEVGDYIWSGATTVGDTVVGVVAGEFSQKRNTGSIIIDAVISMFPVAGEV CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH TAARDAIAIALRMCDDPKVRHDGWEWVALVLCLVAVVPVVGGLLKGIGKLLMRAVSKSED HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LVKLCQEILALIRKAGFGNAVEWLRKLDFNKYQAAVKNAFGMLLDRIGKALHFILNRLGS HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIPARVESYIRKLLPMLEELRKLGDTQIALAFKDLMQLLERVRGHMVEGTWADVKVGSGT HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCEEECCCC TRTMTEEARLAHLAEETKSLGHKPMTLKQYVHKEGWSDLRTFEVGEAIGTFSSKVPIEAI CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH TRAPGEVMIRVVDTRYLASPRTIPGKFWTDTLAPNGLWWRIYSAIKHAWSMNGSYVKIKV HCCCHHHEEEEHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC PTREAMEKLGIEVPAGWNGMRLWKGRIAEQWDDEKEVATMRLLVGGDLQFFVDFDNKFNA CHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCCEEEEEECCCCCCC PVKKWIDAQLANGQLKALRTHWTDVKLPDQATARALMLAERERSAKIRQEGYARRAISDA HHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQLTDEQVP HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA