Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
---|---|
Accession | NC_007510 |
Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is fbpA [H]
Identifier: 78065424
GI number: 78065424
Start: 871673
End: 872707
Strand: Reverse
Name: fbpA [H]
Synonym: Bcep18194_A3950
Alternate gene names: 78065424
Gene position: 872707-871673 (Counterclockwise)
Preceding gene: 78065425
Following gene: 78065423
Centisome position: 23.62
GC content: 67.44
Gene sequence:
>1035_bases ATGAATACTTCACCCGTTAGCCGCCCGCTGCGGCACCTGATTTCCGCGGCGGCCGCCGCGCTGATGCTGACCGGCGCGCT GCACGCCGCGCGCGCGCATGCCGCGACGCTCACGCTGTACAACGCGCAGCACGAGCAGGTCGTCAACCAGCTCGTCAAGG ACTTCGAAGCGCAGAGCGGCATCACCGTGAAGGTGCGCTCGGGCGAAGGCCCGGCACTCGCCGCGCAGCTCGTCGCGGAA GGCGACCGCACGCCGGCCGACGTGTACTTCACCGAGAACTCGCCGGAGCTCGTGCTGCTCGACCGCAAGGGCCTGTTCGC GAAGACCGACGCCGCCACGCTGCAGTCGGTGCCCGCGCGCTTCAACCCGGCGGACGGCAACTGGGTCGGCGTGCTCGCGC GCGAGAACGTGCTCGTCTACAACACCGCGAAAATCCAGCCGCAGCAATTGCCCGCATCGTTGCTCGATCTCGCGAAGCCC GAATGGAAGGGCAAGGTCGGCGTCGCGCCGAGCGATGCAGACTTCCTGCCGCTCGTGAGCGCGGTGCTCGCACTGCACGG CGAAGCCGCGACGCTGCAATGGCTGAAGGGCCTGAAGGCCAACGCGCAGATCTTCGACGACGACGAAGGCGTGACGGCGG CCGTCAACCGCGGCGGCGTGCTGACCGGCATCATCAACAACTACTACTGGGACCGCCTGCACGCCGAGCTCGGCGACAAG TCGACCCGCAGCGCGATCTACCACTTCGGCAAAGGCGACGTCGGCGGTGCCGTCAACGTGTCCGGCGCCGCAGTGCTGAA GGCATCGAAGCACCAGCCGGAAGCGCAGAAGTTCGTCGCATATCTCGTCAGCGAGCGCGCGCAGAAACTCATGGCCGGCG GCCATATCAGCTTCGAGTACCCGCTGCATCCGGGCGTCGCACCCGATCCGATCCTGAAGCCGTTCAACGAACTGAGCCCG CCGGCGCTGACGTTCGAACAGCTCGGCGACGACAGCCAGGCCGGCAAGCTTCTGCGCCAGGCAGGTCTGCTCTGA
Upstream 100 bases:
>100_bases TTCGTACATCGGCGCCGCGCTGTTCGAGGCATGACGGCCCGCAACGCAAGCCAAGGCACACCTTCCCGGCCCCGGCCGGG TGCAACCTGCTAAAAAACAC
Downstream 100 bases:
>100_bases CCATGAGCGACGCCGTGTCCCCCACGGCAAGCACCGCACGCGACGGCGAGCACACCGCGACACGGCGCCGCCCGTCGCGC GCGCTCGTCGCCGCGGCCGC
Product: ABC Fe3+ transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: Iron(III)-binding periplasmic protein [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSGITVKVRSGEGPALAAQLVAE GDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPARFNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKP EWKGKVGVAPSDADFLPLVSAVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELGDK STRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEYPLHPGVAPDPILKPFNELSP PALTFEQLGDDSQAGKLLRQAGLL
Sequences:
>Translated_344_residues MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSGITVKVRSGEGPALAAQLVAE GDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPARFNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKP EWKGKVGVAPSDADFLPLVSAVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELGDK STRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEYPLHPGVAPDPILKPFNELSP PALTFEQLGDDSQAGKLLRQAGLL >Mature_344_residues MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSGITVKVRSGEGPALAAQLVAE GDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPARFNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKP EWKGKVGVAPSDADFLPLVSAVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELGDK STRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEYPLHPGVAPDPILKPFNELSP PALTFEQLGDDSQAGKLLRQAGLL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36612; Mature: 36612
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCC ITVKVRSGEGPALAAQLVAEGDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPAR CEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEECCCHHHHHHCCCC FNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKPEWKGKVGVAPSDADFLPLVS CCCCCCCEEEEEEECCEEEEEECCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH AVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELGDK HHHHHCCCHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCC STRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEY HHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC PLHPGVAPDPILKPFNELSPPALTFEQLGDDSQAGKLLRQAGLL CCCCCCCCCHHHCCHHHCCCCCEEHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCC ITVKVRSGEGPALAAQLVAEGDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPAR CEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCEECCCHHHHHHCCCC FNPADGNWVGVLARENVLVYNTAKIQPQQLPASLLDLAKPEWKGKVGVAPSDADFLPLVS CCCCCCCEEEEEEECCEEEEEECCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH AVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIINNYYWDRLHAELGDK HHHHHCCCHHHHHHHHCCCCCCEEEECCCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCC STRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEY HHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC PLHPGVAPDPILKPFNELSPPALTFEQLGDDSQAGKLLRQAGLL CCCCCCCCCHHHCCHHHCCCCCEEHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]