Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78065358
Identifier: 78065358
GI number: 78065358
Start: 801307
End: 802464
Strand: Direct
Name: 78065358
Synonym: Bcep18194_A3884
Alternate gene names: NA
Gene position: 801307-802464 (Clockwise)
Preceding gene: 78065357
Following gene: 78065359
Centisome position: 21.69
GC content: 68.57
Gene sequence:
>1158_bases ATGATGCCGCGCATCGTCTATCTCGCGACGGCCGACGCACGCGGCCACCTGATGCGCGCACAACTGCTCGTGCACGCGCT GCGTGCGGCGGGCGCACAGGTCGACGTGCTGACGACGTCCGATGCGGGGCAGGCGTTCCTGGCTGCGTTCGACATCGACG CAGCCGTGCTGTCCCGTCACTACGCGGTGCAGTTCGACGAACGGCAGAACATGCTGCGCGACGCGACCGATCGGAATGTC GCGCACTACGTGTTCAGGCCGACGCGCATGCTGCGCGACATCGTGCGACTGCGTGTGATCGTCCGCGATGCCGATCTCGT GATCAACGACTCGTTTCATCCGGCGCTGCTGTTCATGGGCGCGATGCCTGGCTGGCGGCGCCGCGTCGTTCATGTATATG GCGGAAGCCTGCGCCGCGCGTTGACCGCGAATTTCGATGCGCGGCTGCCGCGCGCACTGGCGCGTGCTTTTGCGCGGATC GTCGACTGGCAGATCGATTCGGCGCGGTGCTGCATCGAGCACGATTTTGCGTACGATGCCGCCGATGAAGTCCGGCGATC GTGCACGCATTACCGGCTGCCGACACCGGTGCCGATCGTCGCCGAGCGGCCGGCTTCGGAACCGGCTTCAGCAGCCGTCT ATCTGAACCCGCACTTCCGTGATATCGCGCTCGCCGATGCGTTGTCGGCCGGCATGCGCGACGCAGGGCTCGCCACACAC CGTGTGGGGGAGGGCTATGCCGGGCACGATGGCTGGGCCGGTGTCGACGCCGACTGGGTGACGCGCGCCGCCCATGCACC GCTGATCGTGTCGGCACCCGGCATGGCTGCGCTGTCGATCGCTCGCGTATATCGACGCCCGATCCTGCTCGTGCAGTCCG ATCAGCCCGAGCAGGCGAGCAACGCCGAGCGCGCCGCGCGGCTGCAACTCGTGCATCGCGTCGTCACGTGGCGCGGCGAT GCGGCCGCGTTCCGGCGGGAAGTCGGGCAGGCTGCAGCCGAACTGATGCGCCATCCTGGAACGCAGGCAGGAACGATCGC TGGCCGCGAGCAGGCGCGTGCGCGCGTCGACGCATGGACGTCGCGCCTCCTCGCGCTGCGTCCGCGTGCGCAGGCGGCCG ATACGGATCCGCGATGCGAGGCGCCGGCACCACGATGA
Upstream 100 bases:
>100_bases CGTTGCTCGACGAGATCCGCGCGATCGAAGCCGGGTTCGGCGTGACGGGCGCGCTGGCGATGGTTGCGGCGGGCTGGTTC CAGTCGCTTCGTCCGCGCGC
Downstream 100 bases:
>100_bases ATTCGCTGTCGTTTCGTGACGATCGCCGGCCCGATATCCGGCAGATGCTGGCCGCGACGCTCGGCATGGCAGCCGGTCTC GCGATCTTCTTTCTGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVDVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV AHYVFRPTRMLRDIVRLRVIVRDADLVINDSFHPALLFMGAMPGWRRRVVHVYGGSLRRALTANFDARLPRALARAFARI VDWQIDSARCCIEHDFAYDAADEVRRSCTHYRLPTPVPIVAERPASEPASAAVYLNPHFRDIALADALSAGMRDAGLATH RVGEGYAGHDGWAGVDADWVTRAAHAPLIVSAPGMAALSIARVYRRPILLVQSDQPEQASNAERAARLQLVHRVVTWRGD AAAFRREVGQAAAELMRHPGTQAGTIAGREQARARVDAWTSRLLALRPRAQAADTDPRCEAPAPR
Sequences:
>Translated_385_residues MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVDVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV AHYVFRPTRMLRDIVRLRVIVRDADLVINDSFHPALLFMGAMPGWRRRVVHVYGGSLRRALTANFDARLPRALARAFARI VDWQIDSARCCIEHDFAYDAADEVRRSCTHYRLPTPVPIVAERPASEPASAAVYLNPHFRDIALADALSAGMRDAGLATH RVGEGYAGHDGWAGVDADWVTRAAHAPLIVSAPGMAALSIARVYRRPILLVQSDQPEQASNAERAARLQLVHRVVTWRGD AAAFRREVGQAAAELMRHPGTQAGTIAGREQARARVDAWTSRLLALRPRAQAADTDPRCEAPAPR >Mature_385_residues MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVDVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV AHYVFRPTRMLRDIVRLRVIVRDADLVINDSFHPALLFMGAMPGWRRRVVHVYGGSLRRALTANFDARLPRALARAFARI VDWQIDSARCCIEHDFAYDAADEVRRSCTHYRLPTPVPIVAERPASEPASAAVYLNPHFRDIALADALSAGMRDAGLATH RVGEGYAGHDGWAGVDADWVTRAAHAPLIVSAPGMAALSIARVYRRPILLVQSDQPEQASNAERAARLQLVHRVVTWRGD AAAFRREVGQAAAELMRHPGTQAGTIAGREQARARVDAWTSRLLALRPRAQAADTDPRCEAPAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42442; Mature: 42442
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVDVLTTSDAGQAFLAAFDIDAAVLSRH CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHHHH YAVQFDERQNMLRDATDRNVAHYVFRPTRMLRDIVRLRVIVRDADLVINDSFHPALLFMG HEEEEHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHH AMPGWRRRVVHVYGGSLRRALTANFDARLPRALARAFARIVDWQIDSARCCIEHDFAYDA CCCCHHHHEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC ADEVRRSCTHYRLPTPVPIVAERPASEPASAAVYLNPHFRDIALADALSAGMRDAGLATH HHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHH RVGEGYAGHDGWAGVDADWVTRAAHAPLIVSAPGMAALSIARVYRRPILLVQSDQPEQAS HCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCCHHH NAERAARLQLVHRVVTWRGDAAAFRREVGQAAAELMRHPGTQAGTIAGREQARARVDAWT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SRLLALRPRAQAADTDPRCEAPAPR HHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVDVLTTSDAGQAFLAAFDIDAAVLSRH CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHHHH YAVQFDERQNMLRDATDRNVAHYVFRPTRMLRDIVRLRVIVRDADLVINDSFHPALLFMG HEEEEHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHH AMPGWRRRVVHVYGGSLRRALTANFDARLPRALARAFARIVDWQIDSARCCIEHDFAYDA CCCCHHHHEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC ADEVRRSCTHYRLPTPVPIVAERPASEPASAAVYLNPHFRDIALADALSAGMRDAGLATH HHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHH RVGEGYAGHDGWAGVDADWVTRAAHAPLIVSAPGMAALSIARVYRRPILLVQSDQPEQAS HCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCCHHH NAERAARLQLVHRVVTWRGDAAAFRREVGQAAAELMRHPGTQAGTIAGREQARARVDAWT HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SRLLALRPRAQAADTDPRCEAPAPR HHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA