| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is nitA [H]
Identifier: 78065266
GI number: 78065266
Start: 686007
End: 686930
Strand: Direct
Name: nitA [H]
Synonym: Bcep18194_A3790
Alternate gene names: 78065266
Gene position: 686007-686930 (Clockwise)
Preceding gene: 78065264
Following gene: 78065269
Centisome position: 18.57
GC content: 71.43
Gene sequence:
>924_bases ATGTCCATGTCAGTCATCGCCGCGCTGCAGATCGGCGCATCGCCCGCCGGCACGCGCGCCACGCTCGACACGATCCTCGG CTACGAAACCGCGATCCGCGACAGCGGCGCGTCGCTCGTCGTGCTGCCCGAGGCCGTGCTCGGCGGCTATCCGAAAGGCG AGATCTTCGGCACGCGGCTCGGCTACCGGCTGCCCGAAGGCCGCGACGCGTATGCGCGCTACGCCGCGCAGGCGATCGAC GTGCCGGGGCCGGAAACCGACGAGCTGGCCGCGCTGTCGCAGCGCACCGGTGCGAGCCTCGTGGTCGGCGTGATCGAGCG CGGCGGCAGCACGCTGTACTGCACGGCGCTGTTCTTCGATCCGCGCGACGGGCTCGTCGCGAAGCACCGCAAGCTGATGC CGACCGGCACCGAGCGGCTGATCTGGGGGCAGGGCGACGGCTCGACGCTGCCCGTCGTCGATACGGCGGCGGGCCGCGCG GGCGCCGCGATCTGCTGGGAAAACCACATGCCGCTGCTGCGCTGCGCGATGTATGCGAAGGGCGTGCAGATCTGGTGCGC GCCGACCGTCGACGAGCGCGACGTCTGGCAGAGCTCGATGCGGCATATCGCGCACGAAGGGCGCTGCTTCGTCGTCAGCG CGTGCCAGGTGCAGCCGTCGCCGCGCGCGCTCGGCATCGACGTGCCGGGCTGGGATCCGGAGCGGCCGCTGATCCGCGGC GGCAGCGTGATCGTCGGGCCGCTCGGCGACCTGCTGACGGAGCCGCTGATCGGCGAAGCCGGGCTCGTGACCGCGCGTAT TGATACCGACGAACTCGTGCGGGCACGCTACGACTTCGACGTGGTCGGGCATTACGCGCGCCCCGACGTGTTCTCGCTGC ACGTCGACGAGCGGGCGAAGCGGACGGTGGTGTTCGGCGAGTAG
Upstream 100 bases:
>100_bases GCGATATCATCTGCATTCATGACACTTATCGTTCTATCGATTTGATCGATGACATCATATCGATAAAGATGGCGTTACCC CATTCACCGGAGACGCCTCC
Downstream 100 bases:
>100_bases GGAACGATGGGCCGGGCGCCGCACGGCGGCCCGGAACATGAACGGCGGCGGCGCGCAACGCGCACGCCGTCGTGCCGCGT CAGCGCGTCAGCGCATCGGT
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSMSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAID VPGPETDELAALSQRTGASLVVGVIERGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRA GAAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG GSVIVGPLGDLLTEPLIGEAGLVTARIDTDELVRARYDFDVVGHYARPDVFSLHVDERAKRTVVFGE
Sequences:
>Translated_307_residues MSMSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAID VPGPETDELAALSQRTGASLVVGVIERGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRA GAAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG GSVIVGPLGDLLTEPLIGEAGLVTARIDTDELVRARYDFDVVGHYARPDVFSLHVDERAKRTVVFGE >Mature_306_residues SMSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRLGYRLPEGRDAYARYAAQAIDV PGPETDELAALSQRTGASLVVGVIERGGSTLYCTALFFDPRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAG AAICWENHMPLLRCAMYAKGVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRGG SVIVGPLGDLLTEPLIGEAGLVTARIDTDELVRARYDFDVVGHYARPDVFSLHVDERAKRTVVFGE
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=309, Percent_Identity=47.5728155339806, Blast_Score=287, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6322027, Length=199, Percent_Identity=65.3266331658292, Blast_Score=269, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6322026, Length=112, Percent_Identity=45.5357142857143, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 32941; Mature: 32810
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRL CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCEEEEEC GYRLPEGRDAYARYAAQAIDVPGPETDELAALSQRTGASLVVGVIERGGSTLYCTALFFD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEC PRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAGAAICWENHMPLLRCAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCEECEEECCCCCCCEEEEECCCCHHHHHHHHHC GVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEC GSVIVGPLGDLLTEPLIGEAGLVTARIDTDELVRARYDFDVVGHYARPDVFSLHVDERAK CCEEEECCHHHHCCCCCCCCCEEEEEECHHHHHHHHCCHHEECCCCCCCEEEEEECCCCC RTVVFGE EEEEECC >Mature Secondary Structure SMSVIAALQIGASPAGTRATLDTILGYETAIRDSGASLVVLPEAVLGGYPKGEIFGTRL CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCEEEEEC GYRLPEGRDAYARYAAQAIDVPGPETDELAALSQRTGASLVVGVIERGGSTLYCTALFFD CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEC PRDGLVAKHRKLMPTGTERLIWGQGDGSTLPVVDTAAGRAGAAICWENHMPLLRCAMYAK CCCCHHHHHHCCCCCCCCEEEEECCCCCEECEEECCCCCCCEEEEECCCCHHHHHHHHHC GVQIWCAPTVDERDVWQSSMRHIAHEGRCFVVSACQVQPSPRALGIDVPGWDPERPLIRG CEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEECCCCCCCCCEEEC GSVIVGPLGDLLTEPLIGEAGLVTARIDTDELVRARYDFDVVGHYARPDVFSLHVDERAK CCEEEECCHHHHCCCCCCCCCEEEEEECHHHHHHHHCCHHEECCCCCCCEEEEEECCCCC RTVVFGE EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]