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The map label for this gene is ruvB

Identifier: 78065250

GI number: 78065250

Start: 669106

End: 670176

Strand: Reverse

Name: ruvB

Synonym: Bcep18194_A3774

Alternate gene names: 78065250

Gene position: 670176-669106 (Counterclockwise)

Preceding gene: 78065251

Following gene: 78065249

Centisome position: 18.14

GC content: 67.6

Gene sequence:

>1071_bases
ATGATTGAAACCGACAAACTCGCCACCGAGCAGCGGATCATCGCCGCCACGCCCGCCTCGTCGCACGAGGAGGTGTTCGA
ACGTGCGCTGCGGCCGCGCCAGCTCGACGACTACGTCGGCCAGGAAAAGGTGCGCGGCCAACTCGAGATCTTCATCGAAG
CCGCCAAGCGCCGCTCCGAGCCGCTCGACCACGTGCTGCTGTTCGGGCCGCCGGGCCTCGGCAAGACGACGCTCGCGCAC
ATCATCGCGCGGGAGATGGGCGTGAACCTGCGCCAGACGTCGGGCCCCGTGCTCGAGCGCGCGGGCGATCTCGCCGCGCT
GCTGACGAACCTCGAAGCGAACGACGTGCTGTTCATCGACGAGATCCACCGGCTGTCGCCGGTCGTCGAGGAAATCCTGT
ATCCGGCACTCGAGGATTACCAGATCGACATCATGATCGGCGAAGGCCCGGCCGCGCGCAGCGTGAAGCTCGACCTGCAG
CCGTTCACGCTGGTCGGCGCCACCACTCGCGCCGGGATGCTGACCAACCCGTTGCGCGATCGCTTCGGGATCGTCGCGCG
CCTCGAGTTCTACGATGCCGAGCAACTGTCGCGCATCGTGCGGCGCTCGGCGTCGCTGCTGAACGCGCAGATCGATCCGA
ACGGCGCGCTCGAAATCGCGAAGCGTTCGCGCGGCACGCCGCGGATTGCAAACCGGCTGCTGCGCCGCGTGCGCGACTTC
GCGGAAGTGAAGGCCGACGGCCAGATCACCGCGGCCGTCGCCGATGCGGCACTTGCGATGCTCGACGTCGATCCGGTCGG
CTTCGACCTGATGGACCGCAAGCTGCTCGAGGCGATCCTGTACAAGTTCGACGGCGGCCCGGTCGGCATCGACAACCTCG
CGGCAGCGATCGGCGAGGAGCGCGACACGATCGAAGACGTACTCGAGCCGTACCTGATCCAGCAGGGCTTCCTGCAGCGC
ACGCCGCGCGGGCGCGTCGCGACACTGCTTACCTATCGCCACTTCGGGCTTTCCGTGCCCGACACCGGCCGCACCGAACG
CGGCGAGTGGGATACCCCCGACGGGAAGTAA

Upstream 100 bases:

>100_bases
CAGCCGGTGCGTTGAAGCCAGTGTCGCGCGGCCGCGCAGCGCTCGCCAGTCGGCCGTTCGGCCAGGTGGGCGGGATAGCG
GCGCGCGGTACAATGGCCGC

Downstream 100 bases:

>100_bases
CCCGCCGCCCGAGCCGCACCCGCCATGACGACGCCGCCCAGCTCCCACTCCGCCGCACCCGCACCGGGCCCGCGCTGGGC
CGAGCCGATCCGCAAGCGGC

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDTGRTERGEWDTPDGK

Sequences:

>Translated_356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDTGRTERGEWDTPDGK
>Mature_356_residues
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSEPLDHVLLFGPPGLGKTTLAH
IIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQ
PFTLVGATTRAGMLTNPLRDRFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDF
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEERDTIEDVLEPYLIQQGFLQR
TPRGRVATLLTYRHFGLSVPDTGRTERGEWDTPDGK

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=341, Percent_Identity=70.6744868035191, Blast_Score=476, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 39422; Mature: 39422

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSE
CCCCHHHHHHCEEEEECCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCC
PLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHHHHHHHH
RFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDF
HHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEE
HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
RDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLSVPDTGRTERGEWDTPDGK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIETDKLATEQRIIAATPASSHEEVFERALRPRQLDDYVGQEKVRGQLEIFIEAAKRRSE
CCCCHHHHHHCEEEEECCCCCHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCC
PLDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID
CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEHH
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCHHCCHHHHHHHH
RFGIVARLEFYDAEQLSRIVRRSASLLNAQIDPNGALEIAKRSRGTPRIANRLLRRVRDF
HHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH
AEVKADGQITAAVADAALAMLDVDPVGFDLMDRKLLEAILYKFDGGPVGIDNLAAAIGEE
HHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
RDTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLSVPDTGRTERGEWDTPDGK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA